| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1107 |
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| Symbol | |
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| ID | 8380284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1176603 |
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| End bp | 1177964 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003848 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003161066 |
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| Protein GI | 256832339 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.144574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.611938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC AGAGCCTACG ACATGGTTTG AAAGTCCGGC ACCTCACCAT GATGGGTCTG
GGTTCTGCAA TCGGAGCAGG CCTTTTTGTG GGGTCCGGGA ACGCAATTCA ATCTGCGGGC
CCCGCAGTCC TTGTGTCATA TATTGTCGCG GGAGTCGTTG TTGTCATTAT TATGAGTTTG
CTTGGTGAGC TTGCTAGCGC ACGACCTTCG TCGGGGGCTT TTTCTACGTA CGCGGAACAA
GGGATCGGAC GGTGGGCGGG ATACGCGGTG GGATGGGCGT ATTGGTTCAT GCTCATCATG
GTGCTCGGCG TCGAAATTCT TGCAGCGACC ACGATCATGG CGGGGTGGAT TAACATCCCG
CAGTGGCTGA TCGCCGGGGT GCTGATCGCA CTGTTTGCTG CTGTCAATCT TGTTGGGGTA
CGACAGTTTG GGGAGCTGGA GTTCTGGTTC GCTGCGATCA AAGTTGCGGC CATTATTGGG
TTCCTTGTTG TGGGTGTCCT CATTGTGACT GGCGTGATTT CCGCTGGTCC CAACGTCGGT
GTGGGGCAAC TTGTTGCAGG AGATGGGGGC TTTGCGCCAC GTGGAGCTGC CGGAGTAGCA
GCGGGTCTCC TCGCTGTGAT GTTTGCTTTT GGTGGCATTG AGATCATTAC GATTGCCGCG
GCTGAGGCGA CAAATCCGCA GTCAGCTATT CGCCGTGCCA CGATCTCTAT CATGTGGCGG
ATTTTGTTCT TCTACATTGG GTCAGTTGTT GTCATGCTGG CGGTTGTGCC GTGGAACGAT
CCGCAGTTCG AGCAGGGTGG CTTTGTTGCC GTGTTGAACC GCGCGAACAT TCCCTATGCT
TCGGGCCTGA TGGAAGCCGT GATTGTTGTG GCGCTTCTTT CGGCGTTTAA CGCCCAGCTC
TATGCGACCT CCAGGATGGC TTTTTCCTTG GCACAACGTG GCGAGGGGCC TGCAGTGTTG
TTGCGACTCT CAGGGCGTGA TGTTCCGTGG ATCGCAGTCA TGGTGTCTAT TGTCTTCTCC
GTGCTTGCGG TGACAGCTCA TGCGCTTGAC ACCCAGGGTC GGGTCATGGG CACTCTTCTT
GACGCGGTCG GGGCGTTCCT CCTCATCATT TGGGTGTTCA TTGCTGTGTC GCAGATCCGG
TTGCGCCCCC AGTTAGAGCG TGAGGGGTCG CTCAAGATGC GCACCTGGGC GCATCCGTGG
CTCGCGATTG GGGCACTTGT CTCCATCACT GCTTTCATCG TGCTCATGCT TTTTGATGCG
AACGGGCGCC AGAACCTGTC CTTTTCTCTG GTGATGTTCG CCATGATCTG TGGCACCTAC
GTTATTCATT CGCGCCGAGG TGCGCAGCGA TCCCTACAAT AG
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| Protein sequence | MSDQSLRHGL KVRHLTMMGL GSAIGAGLFV GSGNAIQSAG PAVLVSYIVA GVVVVIIMSL
LGELASARPS SGAFSTYAEQ GIGRWAGYAV GWAYWFMLIM VLGVEILAAT TIMAGWINIP
QWLIAGVLIA LFAAVNLVGV RQFGELEFWF AAIKVAAIIG FLVVGVLIVT GVISAGPNVG
VGQLVAGDGG FAPRGAAGVA AGLLAVMFAF GGIEIITIAA AEATNPQSAI RRATISIMWR
ILFFYIGSVV VMLAVVPWND PQFEQGGFVA VLNRANIPYA SGLMEAVIVV ALLSAFNAQL
YATSRMAFSL AQRGEGPAVL LRLSGRDVPW IAVMVSIVFS VLAVTAHALD TQGRVMGTLL
DAVGAFLLII WVFIAVSQIR LRPQLEREGS LKMRTWAHPW LAIGALVSIT AFIVLMLFDA
NGRQNLSFSL VMFAMICGTY VIHSRRGAQR SLQ
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