Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1070 |
Symbol | |
ID | 8380247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1140651 |
End bp | 1142180 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003811 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate/D-alanyl-D-alanyl ligase |
Protein accession | YP_003161029 |
Protein GI | 256832302 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCG TCATGCTCGT CGAGCTCTTA CGCGCTGGAG TAATCAGCAT CACTAGTGCG CCTCGGTGCG GCTGCAGCCG CACCGAAGTC ACGAATCCCA ATGAGCCTAT GGCAGTAAGG ACGTATAGCA ACGTGTTCAC AGCGCAGGAG ATCGCTTCCA TCACCGGCGG TGAGTTATCT TGTCCGTCAG ATGTCACAGT GACAGGACAG GTCACGATCG ATTCGCGAAC AGTGTCGACT GGGGACTTAT TTGTTGCCGT GGTCGGGGAA CGCTCTGACG GCCACGACTA TGCTTGCGTG GCCCACTCGC AAGGTGCAGT GCTCGTGCTC TCCCAGAAAA ACATCAAGGG GGTTCCCTGT GTGGTTGTCG CTGACACCCA ACGCGCCCTC GGTGATCTGG CACGAGCACA CCTTGCCAGA CTGCGGGAGA AGGGGCATAT CCGCGTCATC GGAGTAACCG GATCTGCGGG AAAAACCACA ACAAAAGATC TTATGGGGCA GATGCTCGCA ACTTATGGGA ACGTTGTGGT TCCCGCTGGG TCACTCAACA ATGAACTGGG CTTGCCACTG ACAGTACTGA AAGCGGACGA AACAACGGAT TTCCTCGTCA CAGAAATGGG CGCATCGGCA GTTGGGGATC TTCACTACCT CACATCTATC GCCCCCCTCG ATATTGCAGT GGTGTTGATC GTTGGCCTCG CACACCTTGG TGGCTTCGGA TCTGCGGAAC TGGTCGCACA AGCGAAAAGC GAACTTGTCA CAGGTCTCCT CCCGCAAGGA ATCGCAGTTC TCAACGCAGA TGACCACCGA GTCATCGCGA TGAAGGAGCT TGCACACGGC CAAGTACGCA CCTTCGGGTC GGTCCGTGGA GCAGATATGC GAGCCATCAA TGCCCGCACA GACGCCGCAG GGCGCGCCCA CTTTGACGTC GAAACAACAG CAGGGGACAC AGCGTCGGTG ACTTTGACTC TTGTGGGCGA ACATCATGTC ACCAACGCGC TCGCGGCACT GACAGCAGTG ACCGCACTGG GAATGCCACT TGACCAAGCT GCTGTTGCTC TGAGTGCTGC ACGAGCAACC AGTCCGCACC GTATGGATGT TGTGGACCGT CCAGATGGTG TCACCATTAT TGACGACTCC TACAACGCCA ACCCAGATTC CATGCGTGCC GCTCTGCGAG CTTTGGCCAC TGTTGCTGGC CGTCAACGCC GGACTGTGGC AGTGCTCGGG GAAATGCGTG AGCTTGGCCC CCAATCACGT ACCTACCACG ATGACATCGG GCGCCTAGTC GTGCGGCTCA ATATCTCGCG GCTTATTGTC GTAGGACAGG GAGCGCAGGG AATTGCTGAC GGCGCCCTGC AAGAAGGGTC GTGGGGAGAC GAGGTCGTGG AAGTCGCTGA CCTCAATGCA GCGCATGCTG CCCTCAACGA CTACCTTCAG CCTAACGATG TGGTGTTAAT CAAAGCGTCT CACGGTTCTG GCCTGTGGCA ACTCGCCGAT GAACTGACTG GAAAGGCAGC AAACTCGTGA
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Protein sequence | MIVVMLVELL RAGVISITSA PRCGCSRTEV TNPNEPMAVR TYSNVFTAQE IASITGGELS CPSDVTVTGQ VTIDSRTVST GDLFVAVVGE RSDGHDYACV AHSQGAVLVL SQKNIKGVPC VVVADTQRAL GDLARAHLAR LREKGHIRVI GVTGSAGKTT TKDLMGQMLA TYGNVVVPAG SLNNELGLPL TVLKADETTD FLVTEMGASA VGDLHYLTSI APLDIAVVLI VGLAHLGGFG SAELVAQAKS ELVTGLLPQG IAVLNADDHR VIAMKELAHG QVRTFGSVRG ADMRAINART DAAGRAHFDV ETTAGDTASV TLTLVGEHHV TNALAALTAV TALGMPLDQA AVALSAARAT SPHRMDVVDR PDGVTIIDDS YNANPDSMRA ALRALATVAG RQRRTVAVLG EMRELGPQSR TYHDDIGRLV VRLNISRLIV VGQGAQGIAD GALQEGSWGD EVVEVADLNA AHAALNDYLQ PNDVVLIKAS HGSGLWQLAD ELTGKAANS
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