Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1058 |
Symbol | |
ID | 8380235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1126403 |
End bp | 1127653 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645003799 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_003161017 |
Protein GI | 256832290 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGACCA AACCCACTCA GGAAGAAAAT GGAGGCGTGT TGAAAGCGCT GCTTCTGGAA AACGTCCATC CCACCGCCGT AGAAATCCTC TCCTCTCATG GATACGAGGT CATTACACGA TCTGGGGCAC TCGATGAGGC GGAACTCATC GAAGCTCTCC AAGGCGTCCA TCTACTCGGC ATCCGATCAA AGACGCAGGT AACGCGTCAG GTCATTGATC ACGCCCCTGA CCTCATCGCG ATCGGCGCAT TTTGTATCGG CACCAACCAG ATCGACTTAG GCGCAGCAGC GGAACGTGGA GTCGGTGTTT TCAATGCTCC GTTCTCAAAT ACTCGTTCAG TTGTCGAGAT GGCGATCTCT GAAATGATCT CGCTGACACG CCGGCTACCA GAACGTAATA AGGCCATGCA CGACGGTGTG TGGGACAAAA CCGCCGATGG ATCTCACGAG ATCCGCGGGA AGACCCTGGG CATCATTGGG TACGGAAACA TTGGTACTCA GTTATCAGTC CTTGCTGAGA ACCTTGGAAT GTCGGTCATT TTCTATGACA CGGCTGAAAA ACTCGCCCTG GGGAACGCAC GACGGGCTAC CACCTTGGAA GAGTTGTTGG GCGCCGCAGA CGTGGTGACA ATCCACGTCG ATGGCAGGCC TGGTAACGCT GGCCTTTTCG GTGCAGAACA GTTCGCTGCC ATGAAACGAG GCGCTATTTT CCTCAACCTC TCGCGGGGTT TTGTCATGGA CAACGAGGCA CTCCGTGACG CCATCATGTC AGGTCATGTC GCAGGAGCGG CAGTCGATGT GTTCCCCACC GAACCGAAAA AACGTGGGGA CGCGTTTGAC TCTGAACTGC GTGGGTTGGC GAACGTGATC CTCACTCCTC ACATTGGTGG TTCCACCCTT GAGGCTCAGG AATCTATTGG TGAGTTCGTC GCCAACAAGC TACGTGACTA TGTCCGCACC GGTTCGACGA CTCTGTCTGT GAATCTTCCG AACCTGGCAC TTGAAACGAC TGGCTCGATC ACCCGCATCG CATTCCTCCA CCGCAACACC CCTGGGGTGC TTGCTGCCGT CAACAATGCG CTCGCAACGC ACAACGTCAA CATCGACGGC CAGTTGTTGG CGACACGCGG TGAGTTTGGG TATGTCGTCA CTGACGCTGG TTCCTCAGTT GACCCTGAAG TTCTGAACGC ATTGAAAGAT ATTGACCAGT ACATTCGCAT CCGTGTGATG CCCCCATCTC ACTTGCGGTG A
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Protein sequence | MVTKPTQEEN GGVLKALLLE NVHPTAVEIL SSHGYEVITR SGALDEAELI EALQGVHLLG IRSKTQVTRQ VIDHAPDLIA IGAFCIGTNQ IDLGAAAERG VGVFNAPFSN TRSVVEMAIS EMISLTRRLP ERNKAMHDGV WDKTADGSHE IRGKTLGIIG YGNIGTQLSV LAENLGMSVI FYDTAEKLAL GNARRATTLE ELLGAADVVT IHVDGRPGNA GLFGAEQFAA MKRGAIFLNL SRGFVMDNEA LRDAIMSGHV AGAAVDVFPT EPKKRGDAFD SELRGLANVI LTPHIGGSTL EAQESIGEFV ANKLRDYVRT GSTTLSVNLP NLALETTGSI TRIAFLHRNT PGVLAAVNNA LATHNVNIDG QLLATRGEFG YVVTDAGSSV DPEVLNALKD IDQYIRIRVM PPSHLR
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