| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1055 |
|---|
| Symbol | |
|---|
| ID | 8380232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1124337 |
|---|
| End bp | 1124774 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003796 |
|---|
| Product | Peptidoglycan-binding LysM |
|---|
| Protein accession | YP_003161014 |
|---|
| Protein GI | 256832287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.863123 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCAGT CAGTGATGAA CGCCCAACTC ATCGAGTTCC CCCGTGAACG CGTATACCCT
GGCGCTTCGC AGCAATCTCA AGCATCACAA GGTGTGCCTG TGCCAGCACG TACACCTCGC
GAAGCGTATG GATTTTTGGG GTTAGGGGGG ATGCGACTCA CTCGACGGGG GCGGGTGCTG
GTGTGGTCCC TCTCGTTGAC GTTCGCTGTG GGTGTAGGAG TTTTGTTGGG TCAAACTGCT
ATGGCTGACA CACCGCACGA TCCCCAAGCC GTCACTGAGT ACGTGGTGAG TGGGGGAGAG
ACTCTATGGT CTATCGCGGT CGCCCATGCG CCCACAAAGG ACCCTCGAGA CACCATCGAC
GCCATCAAGG ATCTGAATCA ACGACTCTCA GGGGCGTTAG ATGTCGGAGA GGTGTTGTAT
TTACCTACGT CTTCGTGA
|
|---|
| Protein sequence | MSQSVMNAQL IEFPRERVYP GASQQSQASQ GVPVPARTPR EAYGFLGLGG MRLTRRGRVL
VWSLSLTFAV GVGVLLGQTA MADTPHDPQA VTEYVVSGGE TLWSIAVAHA PTKDPRDTID
AIKDLNQRLS GALDVGEVLY LPTSS
|
|---|
| |