Gene Jden_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1041 
Symbol 
ID8380218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1109146 
End bp1110240 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content54% 
IMG OID645003782 
ProductrecA protein 
Protein accessionYP_003161000 
Protein GI256832273 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA CTCCGGATCG TGAAAAAGCT CTCGAAGCAG CACTCGGGCA AATCGATCGT 
CAGTTTGGTA AAGGATCGAT CATGCGTTTG GGTGATGACA ATCGCCCGAA GGTGGATATC
ATCCCCACGG GGTCGATTGC GCTTGACGTT GCCCTTGGTA TTGGTGGGCT TCCGCGCGGG
CGAATCGTTG AGGTGTATGG GCCAGAGTCC TCTGGTAAGA CCACCGTTGC GCTGCATGCT
GTTGCCAATG CGCAAAAGAA CGGCGGGATC GCTGCATTCA TTGACGCCGA GCACGCTCTT
GACCCGGTGT ATGCACAGAA GCTAGGGGTT GACACAGATG CGCTCCTTGT GTCGCAACCG
GATACGGGTG AACAAGCCCT CGAAATTACG GACATGCTCA TTCGTTCCGG GGCCATTGAC
CTCATCGTCG TTGACTCTGT GGCGGCTCTC GTTCCCAAAG CGGAAATTGA AGGCGAGATG
GGAGACTCCC ATGTTGGACT TCAAGCGCGG TTGATGTCCC AAGCTCTGCG TAAGATCACC
GGAGCATTGT CCACCACGGG CACGACTGCA ATCTTCATCA ACCAGCTGCG GGAAAAAATT
GGTGTGTTCT TCGGTTCTCC TGAGACGACA ACGGGTGGTA AAGCACTGAA GTTCTATGCA
TCAGTGCGTA TGGACATTCG TCGAATTGAG ACACTCAAAG AAGGGTCGGA ACCGGTAGGT
AACCGCACGC GAGTAAAGGT TGTCAAGAAT AAGATGGCGC CCCCCTTCAA GCAGGCAGAG
TTTGACATCC TTTATGGTGT GGGGATTTCT CGAGAAGGCA GCCTCATTGA CATGGGTGTG
GACAATGGCA TCGTCCGCAA GTCGGGCTCG TGGTTTACCT ATGAAGGCGA CCAGCTCGGC
CAAGGAAAAG AAAACGCGCG TAAGTTCCTG CGTGATAACC CTGAACTTGC TGCAGAAATC
GAGCGGCGCA TCATGGTGAA ACTAGGAATC ATTGATGGGC CTGAGGGTGC AGAGGATGCA
GATGCTGCAA AGGACGCGTC GGTTACTTCC CCTCCTGCAT CGGTCAAGAA GACAGCTGAC
GCAAAGAAGA AGTAA
 
Protein sequence
MAVTPDREKA LEAALGQIDR QFGKGSIMRL GDDNRPKVDI IPTGSIALDV ALGIGGLPRG 
RIVEVYGPES SGKTTVALHA VANAQKNGGI AAFIDAEHAL DPVYAQKLGV DTDALLVSQP
DTGEQALEIT DMLIRSGAID LIVVDSVAAL VPKAEIEGEM GDSHVGLQAR LMSQALRKIT
GALSTTGTTA IFINQLREKI GVFFGSPETT TGGKALKFYA SVRMDIRRIE TLKEGSEPVG
NRTRVKVVKN KMAPPFKQAE FDILYGVGIS REGSLIDMGV DNGIVRKSGS WFTYEGDQLG
QGKENARKFL RDNPELAAEI ERRIMVKLGI IDGPEGAEDA DAAKDASVTS PPASVKKTAD
AKKK