Gene Jden_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1022 
Symbol 
ID8380199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1084930 
End bp1085877 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content56% 
IMG OID645003763 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_003160981 
Protein GI256832254 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTGT GGTGGTCGCT TGAGGAAGCC TTGGCGCACC GTGCTCCTAG TGTGGTGACT 
ATTGGTAATT TTGATGGTGT GCATCGTGGC CACCATATGG TTATTGATGC GGTCATTGCG
GAGGCGCGGC GTAGGCAGGC GTGCGCTGTC GCGATGACGT TTGATCCTCA TCCTGCGCAT
GTGCATCGCC CGGAGCAGGC TGCTCCGCTG CTGACAGGAT TGACGGATCG TCTGGAGTTG
TTGGCTCAGC TTGGACTTGA TGCGGTGTGT GTTGTTGAGT ATTCGCTGGA GTTTGCTCAG
CAATCTCCGC GTGATTTTGT CAAGACATGG ATTGTTGATG CGCTTGCGGC GACGGCGGTG
GTGATTGGTC GCGACGTGCG GTTTGGTCGG GATAATTCTG GCGACTTGTC CACTCTTCGT
GACCTGGGTC AGGAGTTTGG GTTTGATGTG GTTGTCGTTG ACGATCATGG TTCGCCTGGG
GGTGGCGAAC GGTGGTCGTC TTCGATCGTC CGCCAGTTGG TGCGTGGCGG TGAGATGGGG
GCGGTGACGC AGCTCTTAGG GCGCCCGCAT CGTATGCGGG GCGTGGTTGT TCACGGCGAT
GCTCGGGGGC GTGAGTTGGG TTTCCCCACA GCGAACTTGT CTCCTGATTC TGACGGAATG
GTCCCTGCCG ACGGGGTGTA TGCGGGGTAT GTGTCAGTTG TTGGTGGGCA ACGGGCATTG
CAAGGGCTCC CAGCAGCAAT TTCTGTCGGA ACCAACCCAA CATTTGATGG CCAAGAACGA
CGTGTTGAGG CGTATGTGAT TGGGCACAAT AATTTGGACC TCTATGACAA GAACATCATG
GTTGAGTTTG TTGAACGGCT CCGTCCTACA GTGACGTTTT CCTCCTTGGA TGCGCTCATT
GACCAAATGC ATGACGATGT GACCCGGGCG AAATTGCTGC TGCGCTAG
 
Protein sequence
MNVWWSLEEA LAHRAPSVVT IGNFDGVHRG HHMVIDAVIA EARRRQACAV AMTFDPHPAH 
VHRPEQAAPL LTGLTDRLEL LAQLGLDAVC VVEYSLEFAQ QSPRDFVKTW IVDALAATAV
VIGRDVRFGR DNSGDLSTLR DLGQEFGFDV VVVDDHGSPG GGERWSSSIV RQLVRGGEMG
AVTQLLGRPH RMRGVVVHGD ARGRELGFPT ANLSPDSDGM VPADGVYAGY VSVVGGQRAL
QGLPAAISVG TNPTFDGQER RVEAYVIGHN NLDLYDKNIM VEFVERLRPT VTFSSLDALI
DQMHDDVTRA KLLLR