Gene Jden_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1020 
Symbol 
ID8380197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1083474 
End bp1083935 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID645003761 
Productribosome-binding factor A 
Protein accessionYP_003160979 
Protein GI256832252 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACC ATCCACGTGC ACGACGGTTA GCGGAGCGTA TTCAGGTGAT TGTTGCCGAG 
ATGCTTGAGG GGCGCATTAA GGATCCTCGC CTTGGATTTG TGACGATCAC GGATGTGCGT
GTCACTGGCG ACCTTCAGCA CGCGTCAATT TTTTACACGG TGTATGGCGA CGAACAAGAA
CGGCGCAAGA GTACTCGCGC ACTCAATAGT GCGCGTGGCA CCATTCGTAC CGAGGTAGGG
AAGCAAATCG GAACTCGGTT GACTCCAACC ATTGAGTTTC ACCTTGACGC TGTCCCTGAG
TCGGCTGCAA GTTTGGACCG GGCTTTGCAT GAGGCGCGTC TTCGCGATGC AGAGTTGGAG
AAGATCCGTG AGGGAGCTCA GTATGCTTCT GATGCTGACC CTTACCGCCG TCCTCAAGGT
GACGGGGACG AAGCAGAAGA TGAGGGTGAT GACCGCGAGT GA
 
Protein sequence
MVDHPRARRL AERIQVIVAE MLEGRIKDPR LGFVTITDVR VTGDLQHASI FYTVYGDEQE 
RRKSTRALNS ARGTIRTEVG KQIGTRLTPT IEFHLDAVPE SAASLDRALH EARLRDAELE
KIREGAQYAS DADPYRRPQG DGDEAEDEGD DRE