| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1011 |
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| Symbol | |
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| ID | 8380188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1070181 |
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| End bp | 1071404 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645003752 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003160970 |
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| Protein GI | 256832243 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.898355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAACG CCACGCCACC ACGCCGTCGA GTGATCCTGT TGGGCTCAAC GGGGTCAATT
GGTACTCAGG CAATTGATGT GATCTCGCGC CATGAAGCGA TGTTTGATGT GGTGGGTTTA
GCAGCGGGGG GGAGTTCTGT TGAGCTCTTG CTCGAGCAAG CTCATCGTTT TCGTCCAGTA
ACAGTTGCGG TTCATGACAA CAACGCTGGG CGTCAGGTGC GAGCCGAACT TGCACGTACG
CTACCTGAGT GTGAGGTGTT GGTCGGTGAT GGTGCGGCAA GCACCTTGGC GGGACGCCCA
GCGGATGTTG TTCTGAACGG TATGACGGGG GCTGTTGGGT TGGGTCCGAC GTTGGCGGCG
TTGTCTGCGG GGACGACTCT TGCGTTAGCC AATAAGGAGT CCCTTGTGAT GGGCGGGCAC
CTCGTGATGG ATGCCATGGT GCGCCCTGAT CAGATTGTTC CCGTGGATTC CGAGCATTCA
GCGATGGCCC AGGCACTTCG TGCTGGTCAG CGCAGCGAGG TCAGCAGATT CATTTTGACT
GCATCAGGGG GACCGTTTCG GGGAAAGAAA CGTGATGATC TTGTGCATGT CACTGCGACT
GAAGCGTTGA ACCATCCCAC GTGGTCAATG GGGCCGGTGG TCACGGTGAA TTCTTCGACT
CTTGTCAATA AAGCGCTTGA ACTCATCGAA GCGCATCTTC TTTTCCACGT GCCTGTTGAT
GATATTGAGG TTGTTGTTCA CCCACAGTCG GTGATTCACT CAATGATTGA GTTCCGTGAC
GGTTCGGTGA TTGCCCAAGC TTCTCCTCCT GATATGCGGC TGCCCATTGC TTTAGGGTTG
TCGTGGCCTG ATCGCATTGA ATCAGGGGCT TCTGCGTGCT CCTGGTCCTC TCCGACACAA
TGGTCATTTG AACCGGTGGA TACCCACACT TTCCCGGCAA TCGATATTGC TCGCAGAGCT
GTGAAGTCCT CGATGTGGCA CCCTGCTGTC TTCAACGCAG CCAATGAAGA ACTAGTCGAT
GCGTTCTTGT CCGAGCAGAT TCCGTATCTG TCAATCGTTG ACACGTTGGT CAGTGTCCTT
GACGCATGTG ACGAGGTTGT TGCTTCGGGA GAATTCGCCG ACAGCCTAGA CGGTATTGTG
CGCGCTGATC AGTGGGCGCG TGGTTGGGTA CACAACATGG TCCTTACCCC TCATCGTGAA
ACGATACCTG CGGAAGAAGG TTAG
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| Protein sequence | MSNATPPRRR VILLGSTGSI GTQAIDVISR HEAMFDVVGL AAGGSSVELL LEQAHRFRPV
TVAVHDNNAG RQVRAELART LPECEVLVGD GAASTLAGRP ADVVLNGMTG AVGLGPTLAA
LSAGTTLALA NKESLVMGGH LVMDAMVRPD QIVPVDSEHS AMAQALRAGQ RSEVSRFILT
ASGGPFRGKK RDDLVHVTAT EALNHPTWSM GPVVTVNSST LVNKALELIE AHLLFHVPVD
DIEVVVHPQS VIHSMIEFRD GSVIAQASPP DMRLPIALGL SWPDRIESGA SACSWSSPTQ
WSFEPVDTHT FPAIDIARRA VKSSMWHPAV FNAANEELVD AFLSEQIPYL SIVDTLVSVL
DACDEVVASG EFADSLDGIV RADQWARGWV HNMVLTPHRE TIPAEEG
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