Gene Jden_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0973 
Symbol 
ID8380150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1032143 
End bp1032793 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID645003714 
Productdihydroxyacetone kinase, L subunit 
Protein accessionYP_003160932 
Protein GI256832205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.19322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC CTGGTGATTG GGCACGCCGC TGGATGATTC AGTGTGCCCA GGTCATGCGT 
GACCATCGTG AAGAACTCAA TTCTCTCGAC CGTGTCATCG GAGACGGTGA CCATGGTGAA
AACTTAGCGC GTGGGTTTTC AGCACTGGAA CAGCGCTTGG AGGAGTCTGC CTCTGATACT
GACACGTCGA CCGTATTGAC GCTTGCCGCG ACCACGCTCA TGTCCACAGT TGGTGGCGCT
TCAGGGCCCT TGTACGGCAC TGCGTTGCTG CGCGCTGCAA AGGCGGTGCG CAGCCGGCAG
CTCGATGGTG ACTGTGTTAT CGATCTCCTG GTGGCAGCCT GTGAAGGAAT TGAAATGCGC
GGACACGCAG TGACCGGCGA GAAAACCATG GTCGATGCGT GGGAGAGTGC GGTGAAGGCG
GCGCAGGTTG CCGCATTGTC CGGGGCAGAC ACTCAGCAGG TTCTCGTTGC GGCTGCACAG
GGGGCGTGTG CGGGGGCGGA CGCGACCGTT GCGATGCGCG CATCAAAAGG CCGGTCAAGT
TACTTGGGGG AGCGGTCTGT GGGACATAGG GACCCGGGAG CGCAGTCCAC TGCCCTTATC
CTGAAGGCTG CTGCACAAAC CGCCACGAAC GGAGAATTCC ATGACTCATG A
 
Protein sequence
MTVPGDWARR WMIQCAQVMR DHREELNSLD RVIGDGDHGE NLARGFSALE QRLEESASDT 
DTSTVLTLAA TTLMSTVGGA SGPLYGTALL RAAKAVRSRQ LDGDCVIDLL VAACEGIEMR
GHAVTGEKTM VDAWESAVKA AQVAALSGAD TQQVLVAAAQ GACAGADATV AMRASKGRSS
YLGERSVGHR DPGAQSTALI LKAAAQTATN GEFHDS