| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0960 |
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| Symbol | |
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| ID | 8380137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1014065 |
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| End bp | 1014904 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003701 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003160919 |
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| Protein GI | 256832192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA CGTCACCTGC AACACGACAA CCACGCCCGG CACCGCGCCG ACGTCGCCTC
ACCCCAAGAC AACGCGCGCG AATGTCCCAA GCAGTTCAGT ATGCACTTCT CGCGCTCGTG
GTCCTCATCG CTTCCCTCAC TGCGGACTGG CAGCGGATCG CAACCAACCT TTTCAACGTT
GATGTTGCCC GTCACATGCT CCCGCAGCTT CCAGGTGCCG CACTGAATAC CATCACCTAC
ACGGTCCTTG CCTTTGCCCT TGGACTAGCT CTTGGTATTC TCCTGGCACT CATGCGGTTG
TCTTCAGTGG GGCTCTACCG GTGGATCGCC ACCGGATGGA TTGAGTTTTT CCGCGGCATC
CCTGCCCTCC TTGTTGTTTT CACCGTAGGA TTTGCAGTCC CTATCGCCTT TGGAGTGCGC
ATTGACTCCA TCACAGCCAA AGCCGCACTC GCGTTGGGGA TCGTGTCCTC GGCATACATT
GCCGAAACCA TTCGTGCAGG AATCCAAGCA GTACCGCCCG GACAGATCGA AGCAGCGCGT
TCACTAGGCA TGTCCCCCAT GCGCACAATG CTCACTGTCA CGCTCCCACA AGCATTCCGT
ATCGTGCTGC CTCCGATGAC AAACGAACTC ATCTTGCTGA CCAAAGACAC CTCCCTGGTC
TACCTCCTTG GCCTGTCTGC AGCGGCCTAT GACCTGACCA AGGTTGGTCG CGACACCCTG
AACTCAGGAA TCGGCGGATT AACAGGGCTC TTCGTTGTTG GAGCCGCCTA CCTGTGCATC
ACCATCCCGC TTGGCTTCCT TGCCCGCTGG CTTGAAAAGA AAACCGGAGG GTCCCGATGA
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| Protein sequence | MSDTSPATRQ PRPAPRRRRL TPRQRARMSQ AVQYALLALV VLIASLTADW QRIATNLFNV
DVARHMLPQL PGAALNTITY TVLAFALGLA LGILLALMRL SSVGLYRWIA TGWIEFFRGI
PALLVVFTVG FAVPIAFGVR IDSITAKAAL ALGIVSSAYI AETIRAGIQA VPPGQIEAAR
SLGMSPMRTM LTVTLPQAFR IVLPPMTNEL ILLTKDTSLV YLLGLSAAAY DLTKVGRDTL
NSGIGGLTGL FVVGAAYLCI TIPLGFLARW LEKKTGGSR
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