Gene Jden_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0916 
Symbol 
ID8380095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp968089 
End bp968817 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID645003658 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003160877 
Protein GI256832150 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGG CTGTTTCAAC CGATGTGGAT GCTGATCCAG CAAATGATCT CTGCGTGGCC 
CGTGTACCAC TGTTTCAAGG GCTCACACAT ACGCAGCAAG TGGAAGTTGC AGGATTTGCA
CGTACCGTCC GATTAGACGC TGTCGAGCAG GCGTATATAG CAGGCTCGGA TATGTCGCAG
TTGATGGTGG TGCACACCGG TCAGGTGAAG ATCGCTCGAA CAAGTGCGGC TGGGCACGAG
CAGGTGATCC GGGTCCTCGG GCCGGGCGAC TTCATCGGAG AGTCCGCGTT TCTCACCGGC
ACGAGACCCG ATCACGCAGC AGAAGCGCTC GTGTATACTG AACTGTGCGT GTTCCGTCAT
GCCGATCTCG GGCGTCTCGT CGAGAAGTAT CCGAGCATCG GGCCGTGCAT GCTGCAAGGA
GTGAGTCAGC GCTTGGAAGA TACTGAGGCG CGACTGGCTT CTGTCATCTC GGGAAACGTG
AGCTCTCGTC TCGCCGATTG CCTGCTCTCG CTCCCTGCGA CGCCAGGGCC GCGAGGAGCC
ATCGACGTGA CGCTGCCGCT CGCAAAGAAG GACATCGCCT TGCTCCTGTC CACGACACCA
GAGTCCCTCA GTCGGCAACT TCGCAAACTC ACAGACACCG GGGTGATCTC ACAACAGGAA
CAGGGGCGGA TCACGATCAC TGATGTGACC GCGCTCACCG CACTCTCAAC CCTCACGAGG
AGAGACTGA
 
Protein sequence
MPLAVSTDVD ADPANDLCVA RVPLFQGLTH TQQVEVAGFA RTVRLDAVEQ AYIAGSDMSQ 
LMVVHTGQVK IARTSAAGHE QVIRVLGPGD FIGESAFLTG TRPDHAAEAL VYTELCVFRH
ADLGRLVEKY PSIGPCMLQG VSQRLEDTEA RLASVISGNV SSRLADCLLS LPATPGPRGA
IDVTLPLAKK DIALLLSTTP ESLSRQLRKL TDTGVISQQE QGRITITDVT ALTALSTLTR
RD