| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0854 |
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| Symbol | |
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| ID | 8380037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 920288 |
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| End bp | 920935 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003595 |
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| Product | peptide deformylase |
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| Protein accession | YP_003160819 |
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| Protein GI | 256832092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000749472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACC CCATCGTGAT TGATGGTGAC CCTGTCCTTC GTCAGCGTGC GGCGGAGGTG
ACAGAGTTTG ACGATGCGCT GGTCCAGTTG GTTGCGGACA TGTACGACAC GATGCGAGTG
TCGAATGGGG TGGGGCTTGC TGCCCCTCAG ATTGGGGTAG GTCAGCGGAT TTTTGTGTTT
GATGCTCCTG ATGAGGATGA GCAACGGCGT GGTGTGGTGG TCAATCCGTC ACTGATGATT
GTGCAGCGGC CACCGCGTTT TGCGCTCAAA GGTGAGGGGA AGCGCCCCCC GAAGTCGTTG
ACTGATGTGG AAGGGTGTTT GTCGTTTCCG GGCCCAGATT TTGAGGCGAA GCGTCACTAT
GCGGTGCGGG TGACGGGGTG GGATGAGCAC GGTGAACCTG TGGTTATTGA TGGTGAGGGG
TGGTTTGCTC GGGTCCTTCA GCATGAATAT GACCACCTTG ACGGGTTGTT GTATGTGGAC
CGGCTCAAGG GACGGGACAA GGCTGAAGCT CGCGCTATTT CTCAGGAAAA CGGGTGGGGA
GTTCCAGGGT TATCGTGGAT GCCGGGTGTG GACCCGGACC CATTTGGCCA CGACGTCCCT
GACGGTGACG GCGATGTGCA GGAGACTGAC AGCGCTTCTG ATGAGTAG
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| Protein sequence | MIHPIVIDGD PVLRQRAAEV TEFDDALVQL VADMYDTMRV SNGVGLAAPQ IGVGQRIFVF
DAPDEDEQRR GVVVNPSLMI VQRPPRFALK GEGKRPPKSL TDVEGCLSFP GPDFEAKRHY
AVRVTGWDEH GEPVVIDGEG WFARVLQHEY DHLDGLLYVD RLKGRDKAEA RAISQENGWG
VPGLSWMPGV DPDPFGHDVP DGDGDVQETD SASDE
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