Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0776 |
Symbol | |
ID | 8381752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 832868 |
End bp | 834760 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645003517 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003160741 |
Protein GI | 256832014 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.634796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCGG CGTGTGGATG CGAACACGAA CCCGCCGCGG AGATCGAAGA GCTCGATCGG CCATGGTGGA AGGACCCCGA GTTGCTACTG CCGATCTTCT CCGGCGTAGC CCTCTGCACA GGCCTGGCAC TGGACTGGTC CGGGCTGGAG ACGCCCGCAA CGGTAGTGTT TTGGGTTGGC CTGCTGCTGG GTGCGTATAC GTTCGCGCCT GGAGCGATCC AGAACCTTGT CACGAAGCGC AAGCTCGGCA TTGGCCTGCT GATGACGATC AGCGCGGTTG GCGCGGTAAT CCTCGGCTTC GTCGGAGAGG CCGCGGCGCT AGCGTTCCTA TACTCGATCG CCGAGGCACT GGAAGACAAG GCCATGGACC GAGCCCAGGG CGGACTGCGG GCACTGTTGA AGTTGGTACC GCAGACCACG ACGGTGCTGC GTGACGGCAC GGCGGTCGAG GTCACAGCGA AGGACCTCGT GGTTGGCGAG CTGATGCTTG TGCGCCCCGG GGAGCGGATC GCCACGGACG GCATCATTCG TTCCGGACGT TCCAGCATTG ACACCTCAGC GGTCACCGGA GAATCCATTC CGGAGGAGGT CGCGCCCGGC GACGAGGTGC CCGCGGCAGC GATCAACTCC GCCGGTGTGC TGGAGGTCGA GACGACCGCA GCTGGAACGG ACAACTCGCT GACCACACTC GTGGACCTAG TCGAGCAGGC GCAGGCGGAA AAGGGCGACC GCGCCCGGAT TGCCGACCGG ATTGCCCGAC CCCTGGTGCC CGGAGTGATG ATCCTGGCGG TGCTGGTCGG CGTGATCGGC TCGCTGCTCG GCGACCCCGA GACGTGGATC ACCCGTGCGC TGGTGGTCCT GGTCGCCGCG TCGCCGTGCG CGCTGGCAAT CTCCGTGCCG CTGACGGTCG TGGCCGCGAT CGGCGCGGCC AGCCAGTTTG GCGTGGTCAT CAAGTCCGGT GCGGCGTTCG AGCGGCTCGG CGGCATCCGT CACCTGGCGG TGGACAAGAC CGGAACCCTC ACCCGCAACC AGCCCGAGGT TACCGGCGTG GTCCCGGCAG TGGAATTCGA TCGGGCGCAG GTGCTTGCCT TCGCGGCGGC AGTTGAGCAG CAATCGACAC ACCCCCTCGC CGCGGCGATC GCGGCAGCGG TGCCCGAAGT GCCCGCCGCC CAGGACATCA GCGAGGAAGC CGGACATGGC ATCGGCGGCA CCGTCGAAGG TCGACGGGTG CTGGTGGGCA GCCCCCGGTG GATCGACGCC GGGCCACTAA AGGCAGACGT TGAGCGCATG GAGTCCGAGG GCCAGACCTG CGTCCTTGTC ACCGTCGATG ACGCCCTCGC CGGGGCGATC GGGGTCCGCG ACGAGCTGCG GCCCGAGGTA CCCCAAGTCG TGCAGACCCT GCGCACCAAC GGCGTGGAAG TGAGCATGCT CACCGGCGAC AACACTCGCA CCGCGCGGGC GCTGGCTGAA ATCGCCGGAA TCGACGACGT GCGCGCCGAG CTGCGTCCAG AGGACAAGAC AAGCATCGTC GCCGAACTCT CCTCCAAGAC GCCGACGGCG ATGATCGGCG ACGGCATCAA CGATGCTCCG GCATTGGCGG GCGCGACGGT GGGCATCGCG ATGGGAGCAA CCGGTTCTGA CGCCGCGATC GAGTCCGCTG ACGTCGCCTT CACCGGCCAC GACCTCCGGC TGATCCCGCA GGCGCTGCAG CACGCCCGCC GAGGCAGCAG GATCATCAAC CAAAACATCG TGCTGTCTCT GGCCATCATC ATCGTGTTGA TGCCGCTGGC GATCAGCGGC GTGCTGGGCC TGGCTGCCGT CGTGTTGGTT CACGAGGTCG CCGAAGTCAT CGTGATCTTG AACGGCCTGC GGGCTGCGCA AGCGAAGCGC TGA
|
Protein sequence | MSSACGCEHE PAAEIEELDR PWWKDPELLL PIFSGVALCT GLALDWSGLE TPATVVFWVG LLLGAYTFAP GAIQNLVTKR KLGIGLLMTI SAVGAVILGF VGEAAALAFL YSIAEALEDK AMDRAQGGLR ALLKLVPQTT TVLRDGTAVE VTAKDLVVGE LMLVRPGERI ATDGIIRSGR SSIDTSAVTG ESIPEEVAPG DEVPAAAINS AGVLEVETTA AGTDNSLTTL VDLVEQAQAE KGDRARIADR IARPLVPGVM ILAVLVGVIG SLLGDPETWI TRALVVLVAA SPCALAISVP LTVVAAIGAA SQFGVVIKSG AAFERLGGIR HLAVDKTGTL TRNQPEVTGV VPAVEFDRAQ VLAFAAAVEQ QSTHPLAAAI AAAVPEVPAA QDISEEAGHG IGGTVEGRRV LVGSPRWIDA GPLKADVERM ESEGQTCVLV TVDDALAGAI GVRDELRPEV PQVVQTLRTN GVEVSMLTGD NTRTARALAE IAGIDDVRAE LRPEDKTSIV AELSSKTPTA MIGDGINDAP ALAGATVGIA MGATGSDAAI ESADVAFTGH DLRLIPQALQ HARRGSRIIN QNIVLSLAII IVLMPLAISG VLGLAAVVLV HEVAEVIVIL NGLRAAQAKR
|
| |