| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0731 |
|---|
| Symbol | |
|---|
| ID | 8379916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 792567 |
|---|
| End bp | 795371 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003474 |
|---|
| Product | cellulose-binding family II |
|---|
| Protein accession | YP_003160698 |
|---|
| Protein GI | 256831971 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA GAACACTCAT GGCGACCGCA ACAACAGCGA CACTCGCTGT CAGCGGCGTC
GGACTTGCAG CAACAGCAAG TCCACTCGCA ACAGCACCAG CCGCCTACAG CAACGGGGAC
TCCCCATCCG GATATTCATG GTCCAACGTA GAGATCGTTG GGGGCGGATT CGTCCCAGGC
ATCATCTTCA ACCAGAGCGA GCCAGGCCTC GTCTATGCCC GCACAGACAT CGGTGGCGCC
TACCGTCTTG ACGAAGAAAG CGGACGGTGG AAACCACTCA ATGATGACCT CGGCTGGGAC
CAGTGGAGCC ACTCGGGCAT TCTTTCACTC GCCACCGACC CTGTGGACCC CGACCGTGTC
TACCTTGCGG CCGGAACCTA CACAACAGAT TGGGACCCAC AAAACGGCGC TATTCTTCGG
TCGACCGATC GAGGCAACAC CTGGGAAAAA ACCATGTTGC CATTCAAGAT CGGCGGCAAC
ATGCCTGGTC GCGGCATGGG CGAACGGCTC GCCATCGACC CCAACAACAA CAAAATCCTT
TACCTGGGAA CCGAGTCAGG CAATGGATTG TGGAAATCAA CAGACTACGG AGAGACCTGG
AACAAAGTCA CTGAGTTTCC CAACGCAGGG AACTACGTTC AGGACCCCAG CTACGACTAC
ACCGCTGACA ACCAGGGAGT TGTGTGGGTC ACGTTCGACC CCACCTCCGC CAACGCAGGG
CAAACCACCC AAACGATCTA CGTGGGTGTC GCTGACAAAG ACAACACCGT CTACCGGACA
ACAGATGGCG GCAGCACCTG GGAGCGCATC CCAGGACAGC CAACCGGTTA CCTCGCCCAA
AAAGGCGTAC TTGACCACGA AGGCCAACAA CTCTACATTG CGACCTCTGA CACCGGTGGC
CCATACGACG GCTCCAAAGG TGACGTCTGG CGGCTCGACG TAACCAGCGG CGAATGGACC
CAAATCAGCC CGATCCCCTC CTCCAGCGAA GATGCTGCTT TTGGTTATTC AGGGCTCACC
ATTGACCGCA ATGACCCCGA CACCATCATG GTGAACTCAC AAATCTCATG GTGGCCTGAC
ATGTTCATCT ACCGGTCCAC GGACCGGGGA GAAACCTGGT CACCCATCTG GGAATTCGAC
GGATACCCCA ACCGTCTTGC ACGTTTCACG CATGACTACT CTGGCGCGCC CTGGCTTGAT
TTTGGTCGCA CCGTCCAGCC ACCAGAGTCC AACCCGAAAC TCGGGTGGAT GACCCAATCA
TTCGAGATTG ACCCGCACAA CTCAGACCGG TTCTACTACG GCACTGGTGG CGGTATCTAC
GGAGGGACCA ACCTCACCGA CTGGGACACC GGTGGCACAG TTGATATCAG TGTGAAAGCA
CAAGGGATCG AAGAGACCTC TGTCCAAGAT CTTGCTGCTC CTCCAGGGAA CGTCGAACTG
TACTCAGCAC TTGGTGACAT TGGCGGATTC GCTCACACAG ACATCTCCAC CGTTCCTGAC
AGTTTCCACT ACTCCCAACC GCACCATGAC ACCGTGTCAT CAATCGACTT CGCCGAAGAC
AAACCAGACA CAGTGGTGCG TGCCGGAAAA TCAATTTCCA GTGAAACAGA GTCATGGATT
GGCGTGTCCA CCTCAGGCGG ATCCTCGTGG TTTGCGGGCA ACAAGCCCGG CGATGTCACA
GGTCCAGGAA CTGTTGCCAT CAGCGCTGAC GCATCAGCAA TCGTGTGGGC ACCAGAGGGC
GGTCCAGCAC GTCGCTCAAC CACGTTGGGA TCAACGTGGA GTGACCTCAC TGGCCTACCT
GAGGGAGCGC AAGTTGCCTC CGACCGGGAA GATCCCAAAA AGTTCTACGC CTACGCGCAA
GGGAAGTTCT ACTACTCAAC GAATGCAGGT CAGTCCTTTA CCGCATCGGC TTTCACTGGT
CTTCCCACAG AAGGAAATGT GCGCTTCCGT GCAGTACCAG GTCACGAAGG ACACGTATGG
TTGGCTGGCG GAACCACCGG CGAAACCTAC GGAATGTGGC GGTCAACCGA TGGCGGTGTG
ACCTGGTCAC AGCTCACCGG GGTCGACGAA GGTGACTCAA TCGGTTTTGG AAAACCGGAA
ACGACCGGCG ATTACCCCAT CATTTACACC TCGTCAAAGA TTGGTGGCGA GCGCGGGATC
TTCCGTTCTG ACGATGAAGG TGCCACCTGG CACCGCATCA ACGATGACCA AAACCAGTGG
TACTGGACGG GAGCTTCCAT CACCGGTGAC CCAGACGTTG TCGGTCGGGT GTACATCGGA
ACTAACGGTC GCGGCATCAT TGTTGGTGAC GTGGACAACT ACACGCCAGG TGATGGCTCA
GGCGGGGGCG AAGAACCGAC CGACCCAGAT CCAGAACCCA CTGATCCTGA CCCCGAACCA
ACCGACCCGG ATCCAGAACC CACTGATCCT GACCCCGAAC CAACCGACCC GGACCCTGAG
CCCACTGATC CTGGCACAGG GCCAGCAAGT TGCCAGGTCA CCTACTCCAG CAACGACTGG
AACAGTGGTT TCACAGCATC AGTCTCGGTG AAGAACGTGT CTGACTCCCC TATTCAGGGG
TGGTCTTTGG CCTTCGCGTT CAGCGAGGGA CAAACGATCA CGAACATGTG GTCGGCAGAC
GTGAGTTCCT CAGGTTCTCA GGTGACCGTG ACAAACGCTG CCTGGAACGC AACGATCAAC
CCAGGTCAAA GCGTTCAGTT TGGGTTTAAC GGAACGCACA GCGGTTCAAA CCCAGCACCA
AGCAGTTTCA CACTGAATGG GACGGCTTGC GCATCATCTT CGTGA
|
|---|
| Protein sequence | MRLRTLMATA TTATLAVSGV GLAATASPLA TAPAAYSNGD SPSGYSWSNV EIVGGGFVPG
IIFNQSEPGL VYARTDIGGA YRLDEESGRW KPLNDDLGWD QWSHSGILSL ATDPVDPDRV
YLAAGTYTTD WDPQNGAILR STDRGNTWEK TMLPFKIGGN MPGRGMGERL AIDPNNNKIL
YLGTESGNGL WKSTDYGETW NKVTEFPNAG NYVQDPSYDY TADNQGVVWV TFDPTSANAG
QTTQTIYVGV ADKDNTVYRT TDGGSTWERI PGQPTGYLAQ KGVLDHEGQQ LYIATSDTGG
PYDGSKGDVW RLDVTSGEWT QISPIPSSSE DAAFGYSGLT IDRNDPDTIM VNSQISWWPD
MFIYRSTDRG ETWSPIWEFD GYPNRLARFT HDYSGAPWLD FGRTVQPPES NPKLGWMTQS
FEIDPHNSDR FYYGTGGGIY GGTNLTDWDT GGTVDISVKA QGIEETSVQD LAAPPGNVEL
YSALGDIGGF AHTDISTVPD SFHYSQPHHD TVSSIDFAED KPDTVVRAGK SISSETESWI
GVSTSGGSSW FAGNKPGDVT GPGTVAISAD ASAIVWAPEG GPARRSTTLG STWSDLTGLP
EGAQVASDRE DPKKFYAYAQ GKFYYSTNAG QSFTASAFTG LPTEGNVRFR AVPGHEGHVW
LAGGTTGETY GMWRSTDGGV TWSQLTGVDE GDSIGFGKPE TTGDYPIIYT SSKIGGERGI
FRSDDEGATW HRINDDQNQW YWTGASITGD PDVVGRVYIG TNGRGIIVGD VDNYTPGDGS
GGGEEPTDPD PEPTDPDPEP TDPDPEPTDP DPEPTDPDPE PTDPGTGPAS CQVTYSSNDW
NSGFTASVSV KNVSDSPIQG WSLAFAFSEG QTITNMWSAD VSSSGSQVTV TNAAWNATIN
PGQSVQFGFN GTHSGSNPAP SSFTLNGTAC ASSS
|
|---|
| |