| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0680 |
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| Symbol | |
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| ID | 8379865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 732770 |
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| End bp | 733834 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003421 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003160647 |
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| Protein GI | 256831920 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGG CCCTTGAGCA GGCCGCACGC GGTGTGCGGG GGGCGAACCC TCTGGTTGGG
GCTGTCATTG TTGATGAACA CTCAGGTGAC GTCGCTGTAG GGCACCACCG CGGCCGCGGG
ACAGCTCACG CTGAAGTTGA TGCTCTTCGT TGTGCTCGTG ATCGTGGTCT CCGTCTTGAT
GCTGCGACCA TGTATGTCAC GCTGGAACCG TGTAATCACT ATGGTGTGAC TCCTCCATGT
ACGGATGCCA TTCTTGACGC GGGAATCCCC AGGGTTGTCA TTGCTGGTGA AGACCCCCAC
GATGTGGCTG CTGGTGGTGC ACACACCCTT CGCGCTGCCG GGGTTGTGGT GGATATTGTC
CCACTGGACG CAGCGGTGTC ATTGAATGAG CGGTGGCTGA CCGCGCAGCG TGAGCGCCGC
CCCTTTATTC GGGCGAAGAT CGCGCAAAGT TTAGATGGTT TCAGTGCCGC GCTGGATGGC
ACATCACAGT GGATCACTGG GCCGCAAGCA CGAGAGTACG CACATAAGCA GCGGCACCTT
GTTGATGCCA TTGTGGTGGG GACAGGAACT GTTCTGGCCG ACCAACCGAC GTTGACTGCG
CGCTATGACC CCGGTGGTGC CCAACCTTTA CGAGTGCACA TGGGGCATAC CACCACGCCA
CCTGATGCGC CGATACGAGG CGCTGATGGC CGGTTTGTCC ACCTGCCGAC ACATGACCCG
AACCTGGCAG CGCATCAGTT ATATGAGCGT GGTGCACGTG ACATTCTCAT CGAAGGAGGC
CCCCGGCTGA TCGGAGCGTT CCTCGAAGCA GGACTCGTTG ACCTTCTCGA GGTTTATACC
GCGCCCATGT TGCTGGGGGG AGGAACAACG AGTACGGCAT TGTCTTCGGT GGCGTCGCTG
GGTGACGCCC TGCGTTTTCT CCCTGACCCC ATTGCGCAGC CGATGCGCCT CGGCGTGGAT
CTTCTCACTC ACTACATTCC CCGCCACGAT TCCGATGGAC AGACCAACTC GGTTGACGCG
GTGAACACAC AGGCTGTGCC AGGAAAGGAC AATACACATG TTTAG
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| Protein sequence | MNVALEQAAR GVRGANPLVG AVIVDEHSGD VAVGHHRGRG TAHAEVDALR CARDRGLRLD
AATMYVTLEP CNHYGVTPPC TDAILDAGIP RVVIAGEDPH DVAAGGAHTL RAAGVVVDIV
PLDAAVSLNE RWLTAQRERR PFIRAKIAQS LDGFSAALDG TSQWITGPQA REYAHKQRHL
VDAIVVGTGT VLADQPTLTA RYDPGGAQPL RVHMGHTTTP PDAPIRGADG RFVHLPTHDP
NLAAHQLYER GARDILIEGG PRLIGAFLEA GLVDLLEVYT APMLLGGGTT STALSSVASL
GDALRFLPDP IAQPMRLGVD LLTHYIPRHD SDGQTNSVDA VNTQAVPGKD NTHV
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