| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0661 |
|---|
| Symbol | |
|---|
| ID | 8379846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 703686 |
|---|
| End bp | 704510 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003398 |
|---|
| Product | phosphoadenosine phosphosulfate reductase |
|---|
| Protein accession | YP_003160628 |
|---|
| Protein GI | 256831901 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.143312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAC TCCAGGAGGC GCGTGACCGC GCACGCAAGG CTGCAGAAGA ACGCGAAACC
CTGCGCGGAC AAGCTCAAGC AAACCGTGAG GTTGATGAGA CCCGCACCAT CCGCACGCCA
GAGGAACTTC GCCGTTTAGC TGAGGTCGGA GCCACGCAGT TGGGTGGCTC TGGGATTGGG
GCAGCAGACG AAGCGACCTA CAACGAAGTC CTTCAATGGG TGACGCGTGT TTTTGGTTAC
CGCACCGCAG TCGCATGCTC GATGGCAGAT GCTGTGTTAC CGCATCTTGT AGCCACCCAC
ATTCCCTTTG TTGATGTGCT GTTCCTGGAG ACTGGGTATC ACTTCCCCGA AACACTGGGA
ACTCGCGATG CCGTTGCCAC CACGATGAAC GTCTCCGTGA TTGATGTGAC CCCAGAACTC
ACTGTTGCGC AGCAAGATGC AGAGCATGGT GCGAACCTGT GGCAGCGAGA CCCCGCATCA
TGCTGTGCAA TGCGGAAAGT GGAACCGATC CACCGGGCGT TAGGCCAGTA CGAAGTGTGG
ATTACCGGGG TTCGCCGAGA CGAAGCACCA ACACGTGCAC AAACGCCTTT GGTGACCTTT
GATGACACCA ACGGATTAGT CAAGGTGAAT CCTCTGGCTG CGTGGTCTTT TGACGACCTC
ATGAACTACG CCCAGGAGCA CAATGTGATC ACCAACCCGT TGCTCGCTGA CGGATACCCC
TCGATTGGGT GCGCACCGTG CACCCGTCGC GTTCAACCAG GAGAAGACCC GCGAGCTGGC
CGGTGGGCTG GGCTTGCCAA AACAGAATGT GGGCTGCACG TATGA
|
|---|
| Protein sequence | MSALQEARDR ARKAAEERET LRGQAQANRE VDETRTIRTP EELRRLAEVG ATQLGGSGIG
AADEATYNEV LQWVTRVFGY RTAVACSMAD AVLPHLVATH IPFVDVLFLE TGYHFPETLG
TRDAVATTMN VSVIDVTPEL TVAQQDAEHG ANLWQRDPAS CCAMRKVEPI HRALGQYEVW
ITGVRRDEAP TRAQTPLVTF DDTNGLVKVN PLAAWSFDDL MNYAQEHNVI TNPLLADGYP
SIGCAPCTRR VQPGEDPRAG RWAGLAKTEC GLHV
|
|---|
| |