| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0514 |
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| Symbol | |
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| ID | 8379699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 558803 |
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| End bp | 560110 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003246 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_003160481 |
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| Protein GI | 256831754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000226064 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000231347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTCCAT CGCACCCACC CATGGGATGG AACTCCTGGG ACTGCTTCGG GACAACCGTC
ACCGAACATG AGCTCCTCGC CAACGCAGAG GTCATGGCTG CCCGGTTGTT GCCATCAGGA
TGGAACACGA TCGTGTGCGA CATCCAATGG TACGAGCCTG CAGCCAAAGC CGGCGGATAC
AATGACAACG CCGACCTCCA CCTCGATAGC TACGGTCGTC CACTGCCTGT TCCCCAACGA
TTCCCCTCCG CCACAACCAT CAATGGCACT CCCACAGGAT TCACCCACAT CGCCCACAGC
ATTCACGCCA AAGGGCTTGC CTTTGGTGTC CACCTCATGC GTGGAATCCC ACGGCAGGCG
GTGACCAACA ACCTGCCCAT CGCCCACTCG TCGCACTATG CTGGCGACGT CGCTGACACC
ACCTCCACGT GCCCATGGAA CACAGACAAC TACGGGGTCA ACCCCGAACA TCCGGGCGCA
CAAGATTGGT ATGACGCACT CATCGACCAA CTCGCGAGCT GGGGAATCGA CTTCCTCAAA
ATCGACGACA TGCTCGCCCC CTACCACGCC AGCGAGATCG AACTCGTCCA CCGAGCCATC
GCCCGTGCTG AACACCGCCA CAACCGAACA ATCACGCTGT CCCTGTCGCC CGGAACACGG
GTCTCACTGA CCCGACGAGA TCACCTTGCC GCCCACGCAA CAATGTGGCG CATCAGCGAT
GACCTGTGGG ACCGGTGGGA GGACATCACC GCCCAAATCG ACCGCCTCGC CCTGTGGGCG
CCCCACCAAA CACCAGGAGC GTGGGCGGAC GCGGACATGT TGCCACTGGG ACGCATCGGC
GTGAGAGCAG AACGAGGCCA ACCCCGCAAC AGCGCCTTGA CCATCACCGA GCAACGGACC
CTCATGTCCG CATGGACACT GGCTCAGTCG CCTCTCATGA TGGGCGGTGA TCTTGCCACG
AGTAGTGATG TCACCTTCGA GCTCCTCACC AACAGTGCGG TTCTTGAGCA CTACCGCCAA
GGCATTGCAG CGCACTGCAT CCTTGCTGAA GGAAAAACCC GGGTGTGGCT CACCCCTGCC
CACGCGCCCA CGCGCCACGT CGCAGTGATG AACCTCGATG ACACTGCACG CACCCATATC
ATCGACCTTG ATGACATTGC CGCCCCCCAC ACAACAAGCG CGACAGATGT GTGGACCGGA
CGCCACTATG CCGTCACCAC GGACACTGCG ACGCACCCCT ACCGGCACAT CGCAGTGACT
GTACCCGCCC ACGGTGTCGC CCACTTGGCG CTCACCAGTT CGCACTAA
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| Protein sequence | MRPSHPPMGW NSWDCFGTTV TEHELLANAE VMAARLLPSG WNTIVCDIQW YEPAAKAGGY
NDNADLHLDS YGRPLPVPQR FPSATTINGT PTGFTHIAHS IHAKGLAFGV HLMRGIPRQA
VTNNLPIAHS SHYAGDVADT TSTCPWNTDN YGVNPEHPGA QDWYDALIDQ LASWGIDFLK
IDDMLAPYHA SEIELVHRAI ARAEHRHNRT ITLSLSPGTR VSLTRRDHLA AHATMWRISD
DLWDRWEDIT AQIDRLALWA PHQTPGAWAD ADMLPLGRIG VRAERGQPRN SALTITEQRT
LMSAWTLAQS PLMMGGDLAT SSDVTFELLT NSAVLEHYRQ GIAAHCILAE GKTRVWLTPA
HAPTRHVAVM NLDDTARTHI IDLDDIAAPH TTSATDVWTG RHYAVTTDTA THPYRHIAVT
VPAHGVAHLA LTSSH
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