| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0486 |
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| Symbol | |
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| ID | 8379671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 525984 |
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| End bp | 526724 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003218 |
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| Product | major intrinsic protein |
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| Protein accession | YP_003160453 |
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| Protein GI | 256831726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.39672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACCA TGACCCTCGG GGACGTATTC CTTTCCGAAG TCCTCGGAAC CGCCACCCTC
ATCCTCTTGG GTGCTGGGGT AGTCGCTAAC CAAGTCCTCG CCAAAACAAA GGGCAACTCC
ACCGGCTGGG TTCTCATCAC CTTTGGGTGG GGGTTCGCCG TGTTCGCCGG TGTGTATGTG
GCTTTCGCCT CCGGCGCCCA CCTCAACCCA GCTGTCACTC TCGGTATTGC CGCATCGGGT
GCCGAGTGGT TTGTGGACGG TCAGATCGCT GTCGACGCTA CCTCCATCGC GGTGTACCTT
GCCGCTGAAC TGGTCGGTGC CTTTATTGGT GCTGTCCTTG CCTGGTTGGC GTACAAGAAC
CACTTTGATG CAACCGAGGA TCAAGGCTTG AAACTTGCGG TGTTCGCCAC TGGACCGGAG
ATCCGCAACC CGATCTGGAA CACCGTCACC GAAATCATTG GCACCTTCGT TCTCGTGTAC
TGGGTGTTGG TGTCCGGGTA CACCGAAACG ATGATTGGCC CACTGGGTGT GGCACTCATC
GTGGTGGTTA TTGGTATGGG CCTTGGTGGC CCAACCGGGT ACGCGATCAA CCCCGCACGT
GACCTCGGTC CCCGTATTGC CCACGCCATT TTGCCCATCA AGGGCAAGGG GACATCAGAC
TGGGGCTACT CGTGGGTTCC TATTGTTGGC CCCAGCATTG GTGCCGTCAT CGCAGGTCTT
TTGTACGCAG CAATTTACTG A
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| Protein sequence | MDTMTLGDVF LSEVLGTATL ILLGAGVVAN QVLAKTKGNS TGWVLITFGW GFAVFAGVYV
AFASGAHLNP AVTLGIAASG AEWFVDGQIA VDATSIAVYL AAELVGAFIG AVLAWLAYKN
HFDATEDQGL KLAVFATGPE IRNPIWNTVT EIIGTFVLVY WVLVSGYTET MIGPLGVALI
VVVIGMGLGG PTGYAINPAR DLGPRIAHAI LPIKGKGTSD WGYSWVPIVG PSIGAVIAGL
LYAAIY
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