Gene Jden_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0425 
Symbol 
ID8379611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp450479 
End bp451486 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content64% 
IMG OID645003156 
Producttransport system permease protein 
Protein accessionYP_003160393 
Protein GI256831666 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.639871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GCACCACCCA ACGGCGTTCC ATCCTCATCG CCCTCAGCCT GACACTCCTG 
ATCGCCATCA CCCTCAGCCT GGCTATCGGC TCCAGAGTCA TCCCCTTTGC TGACGTCATC
GCGGCGCTGA CCAACCCACG CGACGGCGAC AACGCCCACC TGGTTGTCCT CACCCAACGT
CTTCCCCGCA CCATCATCGC AGTCGTTGCC GGTGCCGCAC TCGCCATCGC CGGCACACTG
ATGCAAGGAC TGACCCGCAA CCCCCTCGCC GACCCAGGCC TCCTCGGACT CAACGCAGGC
GCCTCACTCG CCGTCCTTCT CAGCATTGTC GTCCTCGGCT GGTCCAACCC CGCCATCTAC
GTGTGGGCGG CAGTCCTCGG CGCCATCCTC GCCGCAGCCA TCGTCTACGG AATCGCTGCA
CGAGGCGGGG GAGGGGCCAA CCCCATCACC CTGGCCCTCA CCGGAGCAGC CCTCACCGCC
GGTCTCACCA GCGTCTCCAT GTTCATCGTG ACCACCAACC AACAAGCCCT CAATAACTAC
CGGTTCTGGT CAGTAGGATC ACTCACCGGC CGCGGAATCG ACACCATCAC CGCAGTCCTC
CCACTCGCAC TCGCCGGTGC CCTGCTCGCC GTGATCGCCT CCACCCGACT CAACGCCCTC
GCCCTCGGAG ACGACATCGC CCAAGGACTC GGCCACAACC TCACCACCTC ACGACTCATC
ATCATGAGCG CCACCGTCCT CCTCAGCGCC TCCGCCACAG CGCTCGCAGG CCCCCTCGTT
TTCATTGGAC TGGTCATCCC CCACATCCTT CGCGGTGTCG CCCACGGCGA CTACCGGTGG
CTGATCGCTC TCGCAGCACC CGCAGGAGCC ATCCTCCTCC TCATCGCCGA CACTATCGGC
AGAGTCATCG CCCAACCCAG CGAAGTTGAA GCAGGGTTTG TGGTCGCCTT CCTTGGCGCA
CCAGTGATGA TGTGGATCAT CCAATCAAAA AAGGCGGTCG CTGTATGA
 
Protein sequence
MITRTTQRRS ILIALSLTLL IAITLSLAIG SRVIPFADVI AALTNPRDGD NAHLVVLTQR 
LPRTIIAVVA GAALAIAGTL MQGLTRNPLA DPGLLGLNAG ASLAVLLSIV VLGWSNPAIY
VWAAVLGAIL AAAIVYGIAA RGGGGANPIT LALTGAALTA GLTSVSMFIV TTNQQALNNY
RFWSVGSLTG RGIDTITAVL PLALAGALLA VIASTRLNAL ALGDDIAQGL GHNLTTSRLI
IMSATVLLSA SATALAGPLV FIGLVIPHIL RGVAHGDYRW LIALAAPAGA ILLLIADTIG
RVIAQPSEVE AGFVVAFLGA PVMMWIIQSK KAVAV