| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0415 |
|---|
| Symbol | |
|---|
| ID | 8379601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 439532 |
|---|
| End bp | 440131 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645003146 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_003160383 |
|---|
| Protein GI | 256831656 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.594093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.973959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACGAAG GTGCTGTTCA AGACCTCATC GATGAATTGG GGCGTCTGCC AGGTGTGGGA
CCAAAAAGTG CGCAACGCAT TGCGTTCCAT ATCCTGTCCG CAGACAGCGA CGACATCGCT
CGCCTGACGC AAGCAATTGT TGAGGTCAAA CGCCGGGTGC GTTTCTGCGA CGAATGCGGA
AACGTTGCCG AGGAGGAACG GTGCCGAATC TGTCGTGACC CACGTCGTTC CGCTGAGGTC
ATCTGTGTGG TGGAAGAAGC AAAAGATGTG GTTGCTATTG AACGGACCCG CGAGTTCCGC
GGAAAATACC ATGTTCTTGG GGGAGCAATT AACCCCATGG ACAATGTTGG GCCAGATGAC
TTACGCATTA GCGAGCTGAT GACTCGACTC GCTGACGGTA CTGTCACTGA AATTATCCTT
GCCATGGACC CCAATGTTGA GGGGGAAGCA ACAGCAACTT ACCTTGCCCG GTTGCTTGGT
GCGATCGGTA TTCGTGTGAC ACGGTTGGCT TCTGGGCTAC CCGTTGGGGG AGACTTGGAA
TACGCCGATG AAGTCACCCT CGGGCGGGCT TTTGAAGGCC GACGTTTGAT GGGCAACTAA
|
|---|
| Protein sequence | MYEGAVQDLI DELGRLPGVG PKSAQRIAFH ILSADSDDIA RLTQAIVEVK RRVRFCDECG
NVAEEERCRI CRDPRRSAEV ICVVEEAKDV VAIERTREFR GKYHVLGGAI NPMDNVGPDD
LRISELMTRL ADGTVTEIIL AMDPNVEGEA TATYLARLLG AIGIRVTRLA SGLPVGGDLE
YADEVTLGRA FEGRRLMGN
|
|---|
| |