| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0387 |
|---|
| Symbol | |
|---|
| ID | 8381731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 409624 |
|---|
| End bp | 410586 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003120 |
|---|
| Product | protein of unknown function DUF368 |
|---|
| Protein accession | YP_003160358 |
|---|
| Protein GI | 256831631 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2035] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC CCATGACACC CACACCAACA CCCGCACCAC GGCGCAACAT CATTGGCGAC
TTCATTCGTG GTGCACTCAT TGGCCTGGTG GAAACAATCC CCGGTGTTTC CGGGGGAACA
GTTGCCCTCA TCACTGGGAT CTACGAGGAC GTCCTTGAAT CCGGGAATGA GGTCATTGCA
GCCCTGCGTG CACTGATCAC CGGCCCAACC CGCGCTGAGC TGTTCCGTTA TCACATGTCA
CGTGTCAACT GGCGCTTGGT CATCCCAGTT CTTGTCGGGA TGCTCACCGC TGTCTTCACT
CTTGCCGGCC CTGTGTCCTC AGCAGTGGAA AACCACCCAG AAATCACACG TGCCTTATTT
TTCGGTCTCG TTGCAGGGTC CGTGTGGGTT CCTATCCGAC TCGCTGGCTC AGGGTTTACC
GTGCGTGAAG GAATCATTGG TCTGGCCACC GCCGTGGCCA CGTTCCTTCT GCTTGGGTTA
CCAGCAACTC AACTTGAGCC CACCGGGTGG ATGATTGTGC TTGCCGCATC CATCGCCGTG
TGCGCACTCC TCCTGCCTGG ACTTTCCGGT TCCTTCCTCC TTCTGACTGT CGGTTTGTAC
CAGCCCACAC TCCAAGCAGT TGATGACCGC AACTTTGGTT ATCTTGGCTT GTTCATGATC
GGTGCCCTCG TTGGCCTCGT TGTCATCGTC AAAGCTCTGC GTGTCCTGCT TCACCGGTGG
CACCGGGAAA CGATGATCGC ACTTGCGGGT CTTATGGTTG GTGCGTTGCG GACGCTCTGG
CCGTGGCAGC ACGATGAAGG TCGCGGCCTG ATGGCCCCCG GTGACAACTG GGTGTCTCTC
ACCGCGATTT GTCTTGGCGG GGTTGTTCTA GTGGCCATCA CGCTGGTGAT CGATCACCGC
ATCCAGTCAC GCGCTCTCAA GAACACTGCC GCTGCAGAGC CTGCGCAATC ACCAGCGCTC
TAG
|
|---|
| Protein sequence | MATPMTPTPT PAPRRNIIGD FIRGALIGLV ETIPGVSGGT VALITGIYED VLESGNEVIA
ALRALITGPT RAELFRYHMS RVNWRLVIPV LVGMLTAVFT LAGPVSSAVE NHPEITRALF
FGLVAGSVWV PIRLAGSGFT VREGIIGLAT AVATFLLLGL PATQLEPTGW MIVLAASIAV
CALLLPGLSG SFLLLTVGLY QPTLQAVDDR NFGYLGLFMI GALVGLVVIV KALRVLLHRW
HRETMIALAG LMVGALRTLW PWQHDEGRGL MAPGDNWVSL TAICLGGVVL VAITLVIDHR
IQSRALKNTA AAEPAQSPAL
|
|---|
| |