| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0381 |
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| Symbol | |
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| ID | 8379571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 403998 |
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| End bp | 405335 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003115 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003160353 |
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| Protein GI | 256831626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.491759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCTA CCAGAGCAGT CAGTGCAGCC TTGCTCACCG TATTTGCTGC AGCATCCGTT
GTGGCATGCT CCAGCGACGA CTCGACCACC AACACACCAA CGGAAGCCGC AGAATGTGCC
CCATCGGGTG AAGAGACTGT CAACTTGTCT TTCACCTCCT GGATTCCTGG CATCGAAGAC
GTTGTTGCAA CCTGGAATGA GCAAAACCCT GGCATCCAAG TCGAGGTGCA AACTGGCCCC
AACGGGAACT CGGGCACCTA CCAGAACTTC TTCAACCAGC TCCGGGCTGG AAACGCACCC
GACCTTGGTC AAATTGAATA CGATGCACTT GCTTCATTCC GAGTCCAAGG TGGGTTAGAA
AACATCGGTG GCTGTGATGT GGTGCAGGAC GCGCAAGGCA AGTTCATCGA CTGGACCTGG
GACCAGGTGT CCTTTGGTGA AGAGGGGGCA GCCTACGCGG TCCCTCAGGA CACCGGACCC
ATGGCTCTGT TCTACCGTGC TGACCTTTTC GAAGAAGCCG GGATCGCCGT GCCCACCACG
TGGGACGAGT ACGCACAAGC TGCAGAGAAG ATTGCCGCTG AAGGTGGAAA GATCACGAAC
TTCTCTACCG CAGACATCAA CCAGTTCGCT GGGTTTGCGT GGCAAAACGG TGCGAGCTGG
TTCTCCGCAG ATGACGCCGG CTGGGATGTG ACCATCACTG GTGACGAAAC CCTCGAGGTT
GCGAACTACT GGCAGGACCT GCTTGAACGT GACCTGGTTG CCACCTACCC GGCGTGGACC
GACGAGTGGA ACAACGCGTA CAACTCCTCC GAAGTGTGGA CCTGGGTTTC CGCAGTCTGG
GGTGCAAACA CCATTCAGGA CGGTGCCCCC GACACGGCAG GTCAGTGGGC GGTTGCACCG
ATGCCACAGT GGGACACTGC TGCTCCCGCT GCTGGTAACT GGGGCGGATC ATCGATCGCT
GTCTTCTCCG GTACTGACTA CCCTTACGAA GCAGCGCAGT TTGCTACCTG GTTGAACACC
TCTGAAGAGG CCTTGACGAT GCTCGCGGAC TCAGCGAACA TCTACCCAGC CACAACTGAA
GGTCTGACCC TTCCTGTTCT GCAAGAAGGT GTGGAGTTCT ACGGTGACCA GGTGATTTGG
GATGTCTTCG CTGAGGCAGC GAACCAAGTG CCATCGAACT TCACCTGGGG TCCCACCATG
ACGGACACCT ATGCATCAAT CTCTGATGGG TTCAAACTGG TGGCCACAGG GACGAGCACT
GTGGAAGATG CACTTGTCAA CGGTGAAGAA GCAACTGTGT CCACCATGAA GTCACAGTCC
ATCCCGGTCA AGGAGTAG
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| Protein sequence | MRPTRAVSAA LLTVFAAASV VACSSDDSTT NTPTEAAECA PSGEETVNLS FTSWIPGIED
VVATWNEQNP GIQVEVQTGP NGNSGTYQNF FNQLRAGNAP DLGQIEYDAL ASFRVQGGLE
NIGGCDVVQD AQGKFIDWTW DQVSFGEEGA AYAVPQDTGP MALFYRADLF EEAGIAVPTT
WDEYAQAAEK IAAEGGKITN FSTADINQFA GFAWQNGASW FSADDAGWDV TITGDETLEV
ANYWQDLLER DLVATYPAWT DEWNNAYNSS EVWTWVSAVW GANTIQDGAP DTAGQWAVAP
MPQWDTAAPA AGNWGGSSIA VFSGTDYPYE AAQFATWLNT SEEALTMLAD SANIYPATTE
GLTLPVLQEG VEFYGDQVIW DVFAEAANQV PSNFTWGPTM TDTYASISDG FKLVATGTST
VEDALVNGEE ATVSTMKSQS IPVKE
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