Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0364 |
Symbol | |
ID | 8379554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 385822 |
End bp | 387342 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003098 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_003160336 |
Protein GI | 256831609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3534] Alpha-L-arabinofuranosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT ACGTCATCAA CCTCGACCTA CCCGGGGCCG TCCAATCCCG CCACCTCTAC GGGCACTTCG CCGAGCACCT CGGCCGCTGC ATTTACGGCG GGTTCTGGGT TGGAGAAGAC TCAGACATCC CCAATGAGCG CGGAATCCGC AGTGATGTCG TCGAGGCGCT GCGCGCCCTG AACATCCCCA ACCTGCGCTG GCCAGGGGGG TGTTTTGCCG ACGAATACCA CTGGAAAGAC GGCATTGGAC CACGCGAACA ACGCCCACGC ATGGTCAACA CCCACTGGGG GAACGTCGAA GAAAACAACC ACTTCGGCAC CCACGAATTC ATGGACCTCG TCGAACTCCT GGGCACCGAC GCCTACGTCA ACGGCAACGT TGGGTCCGGA ACAGTACGCG AAATGAGTGA ATGGGTGGAA TACCTCACCC GTGACGGTGA CTCACCCATG GTGCGCCTGC GAAAAGAAAA CGGCCGCGAA CAACCGTGGA AGGTTCCCTA CTGGGGAATT GGAAACGAAG CCTGGGGGTG CGGGGGCAAC ATGACCGCTC AAGCCTATGC AGACCTGGCC CGCCAATACG CCACCTTCCT CCGTGACCAC GGAGACAACA AGCTTTACCG CATCGCTGCG GGAGCAAACG TGGACGACTT TGGCTGGACT GAAGCGCTCA TGAAGTCGGT GGGATGCGTG GGGTGCAACT CTTCGGGTGT GGCAAGCCCT TACCAGGCGA TCTCCTTGCA CTACTACACG ATGTCTGCGG AGTGGGAAAA CAAAGGCAAA GCGACCGTTT TCACTGACGA CGAATACTAC GCGACCATGG CCAACGCGTG GCACATCAAC ACCCTCCTTA AACGCCACAC CACGATCATG GACCACTACG ACCCGTGCAA AACCATCGGT CTGGTCCTTG ATGAATGGGG CACCTGGTGG CAGGTTGAAG AAGGCACAAA CCCTGGTTTC CTCTACCAAC AAAACACCAT GCGCGATGCC CTTGTTGCCT CAGTGCACTT TGACATCTTT GGCAAGTATG CAGACCGGCT CTTCATGGCG AACATTGCCC AAACCGTGAA CGTGCTGCAG GCCATGATTC TCACCGACCC AGACACTGGT GCCCTCGTCC TCACCCCGAC CTACCACGTG TTTGAGATGA ACACCGCCCA CCACGATGCG CATGTGCTTG ACGTCGTTGC TAAGGATGCA CCTGTTTCGC GGAAAATTGG TGACAAAAAG CTTCCAGCGC TGTCTGCATC AGCATCTACC AAGGACAACA GTGCCCTCAT TTCGCTGTCA AACCTTGACC TCGACCATGC GCGCACCATC ACCCTTGATC TGCGTGGACG TGAGGTCACT GGGGTGACGG CTCGGATCTT GACTGCACCC GATGTGCGGG ACCACAACAC CCCTGACGCC CCAGACGCGG TCGCCCCCCG TGAGTGGACC GAGATCTCTC GGGTTGATGG TGGGTTGCAG GTTGAACTTC CCGCCCACTC CTATGTGACA GTGAGCCTCG ACCTGGCGTA A
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Protein sequence | MTTYVINLDL PGAVQSRHLY GHFAEHLGRC IYGGFWVGED SDIPNERGIR SDVVEALRAL NIPNLRWPGG CFADEYHWKD GIGPREQRPR MVNTHWGNVE ENNHFGTHEF MDLVELLGTD AYVNGNVGSG TVREMSEWVE YLTRDGDSPM VRLRKENGRE QPWKVPYWGI GNEAWGCGGN MTAQAYADLA RQYATFLRDH GDNKLYRIAA GANVDDFGWT EALMKSVGCV GCNSSGVASP YQAISLHYYT MSAEWENKGK ATVFTDDEYY ATMANAWHIN TLLKRHTTIM DHYDPCKTIG LVLDEWGTWW QVEEGTNPGF LYQQNTMRDA LVASVHFDIF GKYADRLFMA NIAQTVNVLQ AMILTDPDTG ALVLTPTYHV FEMNTAHHDA HVLDVVAKDA PVSRKIGDKK LPALSASAST KDNSALISLS NLDLDHARTI TLDLRGREVT GVTARILTAP DVRDHNTPDA PDAVAPREWT EISRVDGGLQ VELPAHSYVT VSLDLA
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