Gene Jden_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0359 
Symbol 
ID8379549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp378787 
End bp380415 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content59% 
IMG OID645003093 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003160331 
Protein GI256831604 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCC CCACCCCCAC CGGCAGGCGC ATCGGCCTAC ACGCAAAAAT CCTGGCAACC 
GGAGCGATCG GAATCGCCGT TGCTGTCCTC CTTGCCGCCT TGTCCTGGTT CACCACCACC
ACCATGACAA ACAACATGCA CGACGCCGAC GAACTAGCCG ACCTGCGGCT TCAAATCGCC
GATGTGTCCC GCTACAACTC CGACGTCACC GGTTGGCAAA CCGCCTACGC CTGGGACGCC
AGCACCCTGG GGCCAGCAGA AGCCGTGGCT GACCACTCAG CAAACCGCAA AGGGTACCTC
GACTCAGCCG AACAACTGCG CACCCTGCTC ACCAGCGTGA ACACCGACGC TATGACAGAC
AGTGAAAAGG CCATCTACGA CCAGATCACG GCCAAATGGG ATGAGTTCTT TGTCGCTGAT
GATCAAGTTG TTGCGCTCTA CAAAGCGGGA ACCTCTGACG CAAAAGAACA AGGCGACGCC
CATGTTGTCG GCCCCGTCTA CGAGATCTAC TACGCCATCA CAGAACTCAC CGCACAACTC
GACGACGAAC TCGACGTCCG AGCCGAAGCC CTCCAAAAGA GCATCGACAA CGAAGCGACC
AGGGCGACAA TCGCGTCCAT CATCGTCCTC ATCATCGGTG TCGTCCTCGT CTACGCAGCC
AGCCACATTG TGGGCCGGTC AGTGAAACAC GCAGCCAGCG AAGTGAAACG GGCCCTCGCA
TCGTTTGCCG CAGGTGACCT CACCGACACA CCCAACGTCA CCTCACGTGA CGAACTCGGC
GACATGGCCG CTTCACTCAC TGAAGCACAA AACGCTGTGT CCCACACCCT GCACAACGTC
CTCACCTCAG CAGAACGAGT CGCAGACACC GCAGCACACG TCACCGACGG CACCCTCTCC
GTGTCCGCAA CAGCGGAAGA AACCTCCACC CAAGCCGGGG TGGTCGCCAG CGCCGCCGAC
GAAGTCAGCC AATCCATCCA AGTCGTTGCA TCGGGAACCG AAGAAATGGG AGCATCCATC
CGCGAAATCT CCCAAAATGC CACCGACGCA GCCAACGTTG CCCACCAAGC AACAGGGATG
GTCGCCGAAA CCAATGAAGC AGTCACCCGA CTCGGGGTGT CCAGCCAAGA AATTGGGGCC
GTCGTCAAAG CGATCACGTC CATTGCCGAA CAAACGAACC TGCTCGCCCT CAACGCCACC
ATCGAAGCCG CCCGAGCCGG AGACGCCGGG AAAGGGTTCG CCGTGGTCGC ATCAGAAGTC
AAAGACCTCG CCCAAGAAAC AGCGCGCGCA ACCGAAGACA TTGCACGCCG AGTTGGTGTG
ATCCAAGACG ACACCGGTCA AGCAGTCAGT GCAATGACCC GGATCTCTGA CATCATCAAC
GACATCAACA ACTACCAACT CACCATCGCC TCCGCTGTTG AAGAACAAAC CGCAACCACC
AACGAAATGG CCCGGTCCGT CTCCGAAGCA GCATCCGGCT CCACCCAAAT CGCCGACAAC
ATCAACAGTG TTGCCAGCGA AGCACAAGCC TCCAGCGCCG TTATCGGGAC CATGCGCGAC
TCCGCGCAAC ACCTCGCCGA TGAATCACGA AACCTCCGCG AAGCACTGGC AGTCTTCACA
CTGCGCTAA
 
Protein sequence
MASPTPTGRR IGLHAKILAT GAIGIAVAVL LAALSWFTTT TMTNNMHDAD ELADLRLQIA 
DVSRYNSDVT GWQTAYAWDA STLGPAEAVA DHSANRKGYL DSAEQLRTLL TSVNTDAMTD
SEKAIYDQIT AKWDEFFVAD DQVVALYKAG TSDAKEQGDA HVVGPVYEIY YAITELTAQL
DDELDVRAEA LQKSIDNEAT RATIASIIVL IIGVVLVYAA SHIVGRSVKH AASEVKRALA
SFAAGDLTDT PNVTSRDELG DMAASLTEAQ NAVSHTLHNV LTSAERVADT AAHVTDGTLS
VSATAEETST QAGVVASAAD EVSQSIQVVA SGTEEMGASI REISQNATDA ANVAHQATGM
VAETNEAVTR LGVSSQEIGA VVKAITSIAE QTNLLALNAT IEAARAGDAG KGFAVVASEV
KDLAQETARA TEDIARRVGV IQDDTGQAVS AMTRISDIIN DINNYQLTIA SAVEEQTATT
NEMARSVSEA ASGSTQIADN INSVASEAQA SSAVIGTMRD SAQHLADESR NLREALAVFT
LR