Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0348 |
Symbol | |
ID | 8379538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 367401 |
End bp | 369392 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003081 |
Product | ABC transporter related |
Protein accession | YP_003160320 |
Protein GI | 256831593 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.768573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAA CAGAGCCGAT CGACCCCACC AACGACGACG CACAAGCAGA ACAGGCGCGC ATCGCTGCTG ACGACTGGGG TGGGGGCGTG GCCCCAGGGA AACCCGCGAA CTTTGGGAAG AGTTTCGCAC GACTCATTGG TCTGCTGCGC CCCTACGCGT GGGCGTTCAT CGGGGTGTCC CTCCTTGGCG CCATCGGTGT GGTGTTGTCT GTTCTCACCC CACGCGTGCT GGGAAACGCC ACAAACGTGG TGTTTGAAGG GTTCGTGTCC CGGCAACTGC CTAGCGGTGC CACGAAAGAC CAAGTCGTTG AAGGCTTGCG TACCCAAGGG CAAGACGATT TTGCCAATGT TGTGTCTGCC ATGGACATCA TTCCTGGTCA AGGTATTGAT TTCACGCGCC TTGGAGAGCT CATCGTTCTC GCACTGGGGT TGTATGTCGT GGCGGCACTG CTCATGTGGA TTCAAGGATA TGTCATCAAC GTCATCATGG TTCGAACCAT GTGGCGGTTA CGGCGAGATG TAGAAAACAA GATCCACCGG CTCCCCTTAT CCTACTTTGA CCAGGTGCAA CGTGGAGAAC TGATCTCGCG GGTGACCAAC GACATCGACA ACATCACCCA AATGATGCAA CAGTCACTGT CCACGGTGGT GACCTCAGTG CTCACGGTTC TTGGCGTGGT CATCATGATG CTGACCATCT CGTGGCAGCT CACCCTGGTT GCCCTGGTGT CGCTCCCGCT GATGGCGATC ATCTTCGGGG TCATCGGGCC ACGATCACAA AAAGCCTTCT CCACCCAGTG GCGCAAAGTA GGCCGCCTGA ACGCCCGAGT TGAGGAATCG TTTTCTGGTC ATGCACTGAT GAAGGTCTAT GGGCGCGAAC GTGCCAGCGT TGAGGCGTTC CGCGCCGAGA ACGAGGAATT GTATGAGGCC TCGTTCAAAG CGCAGTTCCT TGCCAACACG ATGATGCCGT CGATGATGTT CATTGGGAAC CTCACTTACG TGGGTATTGC CGTCATGGGT GGTGTCGCTG TGGCTAGTGG GCAAATGCGG TTGGGGGATG TGCAGGCGTT TATTCAGTAT TCCCAGCAGT TCACTCAGCC ATTGTCTGAG TTGGGTGGGA TGGCCGCGGT CATTCAGTCA GGCACTGCGT CAGCCGAGCG AGTGTTCGCT CTCCTTGATG TCGAGGAGGA AAGTGAGGAA CCCGCCGATG CGCCTGCTCC CGCCCACGGG GATGGCACCA TTGAGTTTGA CCACGTCGCG TTTTCGTACC GACCTGATCA GCCGTTGATT GAGGACTTGT CATTTACTGT CGCACCAGGG CAGACCGTGG CTATTGTCGG GCCAACCGGT GCAGGCAAGA CGACGCTCGT GAACCTCATC ATGCGGTTCT ATGAACTCGA TGGTGGCCGT ATTGTCATCA ACGGTCAGGA TATTGCTGAG CTCACCCGCC ATGATGTGCG GGCTACTACC GGAATGGTGT TGCAGGACCC GTGGTTGTTT GCTGGCACAA TCCGGGAAAA CATTCGCTAT GGCAAAGCGA CCGCTTCTGA TGAGGACATT GTTGCGGCTG CAAAAGCCAC CTATGTGGAC CGGTTCGTGC ACTCGTTGCC TGATGGGTAC GACACCGAAC TTGATGAAGA CGCATCGAAC TTGTCGGCAG GGGAGCGCCA GCTCATCACC ATTGCTCGTG CCTTTGTGTC GCAACCTTCC GTGCTCATCC TTGATGAGGC GACGTCGTCG GTGGACACTC GCACTGAACT GCTCCTCCAG CACGCGATGG CGGCATTACG CCAGGGGCGG ACATCCTTTG TCATTGCCCA CCGGTTATCC ACGATTCGTG ATGCTGACAT GATCCTTGTG ATGGAGCATG GGCGGATTGT AGAGAAGGGA AACCACGAGG AACTGATTGC TCGCGAGGGG GCGTATTACC GCCTCTATCA GTCACAATTC GCGCAGGCTG CGGTCAGCGA CGACGCCGAA ACATTGGCGT GA
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Protein sequence | MSTTEPIDPT NDDAQAEQAR IAADDWGGGV APGKPANFGK SFARLIGLLR PYAWAFIGVS LLGAIGVVLS VLTPRVLGNA TNVVFEGFVS RQLPSGATKD QVVEGLRTQG QDDFANVVSA MDIIPGQGID FTRLGELIVL ALGLYVVAAL LMWIQGYVIN VIMVRTMWRL RRDVENKIHR LPLSYFDQVQ RGELISRVTN DIDNITQMMQ QSLSTVVTSV LTVLGVVIMM LTISWQLTLV ALVSLPLMAI IFGVIGPRSQ KAFSTQWRKV GRLNARVEES FSGHALMKVY GRERASVEAF RAENEELYEA SFKAQFLANT MMPSMMFIGN LTYVGIAVMG GVAVASGQMR LGDVQAFIQY SQQFTQPLSE LGGMAAVIQS GTASAERVFA LLDVEEESEE PADAPAPAHG DGTIEFDHVA FSYRPDQPLI EDLSFTVAPG QTVAIVGPTG AGKTTLVNLI MRFYELDGGR IVINGQDIAE LTRHDVRATT GMVLQDPWLF AGTIRENIRY GKATASDEDI VAAAKATYVD RFVHSLPDGY DTELDEDASN LSAGERQLIT IARAFVSQPS VLILDEATSS VDTRTELLLQ HAMAALRQGR TSFVIAHRLS TIRDADMILV MEHGRIVEKG NHEELIAREG AYYRLYQSQF AQAAVSDDAE TLA
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