Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0297 |
Symbol | |
ID | 8379490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 318620 |
End bp | 319570 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003033 |
Product | periplasmic solute binding protein |
Protein accession | YP_003160272 |
Protein GI | 256831545 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0234277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0497295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAGCT ATCGACCTGC GAAAACACTC CTCAGTGTGA TCGTGATAGT CCTCCTCAGC AGCGGCTGCA CGGGGAGTTC AACCCAGCCC GTGCATCAGC AAACCGCCCC TGAACAGGGA CAAGAAGCCA CCCCAGACAT TCGGGTGACC ACCACATTCA CCATCACCGC TGACATGGTC GCCGCCATTG GAGGAGAGCA CGTGACTGTT ACGTCATTGA CCCCACCAGG CGCAGACATC CACTCCTACG AACCCACGCC CACCGACATC GTCACTGCGC AACATTCTGA CCTCATCGTG GAGCATGGGC TTGGGCTGGA CTCGTGGCTC AGCACAATGA CAAACTCCGT GTCCAGTGCG CGCATCACCG TGACGGAGGG AATCACCCCC ATCCCGATCG CCGCAGGAGA GTACGAGGGG GTGCCCAACC CACATGCGTG GCTTTCTGCG GAGAACGCCC ACATTTACAT TGCGAACATT GTGAGAGTGC TCAGTGATAT TGCGCCAGAG CACGCCGCCG AGTTCGCCGA ACGTGGTCGC GCCTACAGCG ACCGCATCGA CACACGGTTT GAGCAGATCC GTGAACTCAC CGAAACGATC CCACCGGAGA ACCGCACGGT GGTGACGTGT GAAGGGGCGT TCAGTTACCT CACCGCAGAA CTTGGGTTCA CTGAAGCGTG GCTGTGGCCG GTCAACGCCG AACGCGAAGC AACCCCACGG CGGGTTGCCG CCGTCATTGA CACAGTGCGT GACCAGGGGG TTCCCACAGT GTTTTGCGAA TCAACAGTGG GTGATAAACC AATGCGCCTG GTCACCGAAG ACACAGGTGC ATCGTTTGGG GGTGTGCTCT ACGTTGATTC GCTGACAGAC GCGGCAGGAC CTGCCCCCAC CTACCTTGAT TTACTCAGCT ACAACGCAAC GGTCATCACA CAAGGATTGG CAACATCATG A
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Protein sequence | MKSYRPAKTL LSVIVIVLLS SGCTGSSTQP VHQQTAPEQG QEATPDIRVT TTFTITADMV AAIGGEHVTV TSLTPPGADI HSYEPTPTDI VTAQHSDLIV EHGLGLDSWL STMTNSVSSA RITVTEGITP IPIAAGEYEG VPNPHAWLSA ENAHIYIANI VRVLSDIAPE HAAEFAERGR AYSDRIDTRF EQIRELTETI PPENRTVVTC EGAFSYLTAE LGFTEAWLWP VNAEREATPR RVAAVIDTVR DQGVPTVFCE STVGDKPMRL VTEDTGASFG GVLYVDSLTD AAGPAPTYLD LLSYNATVIT QGLATS
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