Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0256 |
Symbol | |
ID | 8379451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 272115 |
End bp | 273461 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645002990 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003160233 |
Protein GI | 256831506 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0048883 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACACC CACCCTCCCA GCCTGAGGCC ACCCGTACCT CACGCAACCC CTACGCCACC GTGCTTTCCC ACCCCGGAGC AGCACGCTTC TCCCTCGCCG GAGCACTCGC CCGTTCACCC ATGTCTATGG TCGGAATCGG CATCGTCCTC ATGATCAAAG CCGCCCACAA CTCCTACGCC CTCGGCGGAC AAGTCTCTGC GGCGTACATC ATCGCCCAAG CGATCTGCTC CCCCCAGCTA GCCCGCCTCG TTGATGCACA CGGGCAAGCA CGTGTCATGC GGCCCGCCGT GATCGCCACA GCAACCTCAC TCACCCTCCT GGTGGCCACC ACAGTCATAG GCGCCCCCAT TGCCTTAGCG TTCCTCTTCG CCATCACCAC AGGGATGAGC ATCGGGTCAG TAGGCGCCAT GGTTCGGGCA CGCTGGACCC ACCTCATCAC CAACCCCCGC GAACTACACA CCGCTTACTC CTTGGAAGCA GCGATCGACG AAATGATCTT CGTCATCGGC CCCATCATCG CGACCTTCCT TGCCACCGGT GTCAGCTACT ACGCCGGTCT CCTTGTTCCC ATCGTTCTCG TCCTGACCGG TGGGCTCTGG TTCCTCAGCC AACGCGCCAC TGAACCGCCC GTCCTCGCCC CCGACCCCAC CAGCCCGGCC ACCTCGGTCC TCACCAACCC TGCGATGCTC GCCCTCATCG GTGTGTTCAT TGGGGTAGGA GGACTCTTCG GTGCTACTGA CGTCGCCACC CTCGCATTTG CAGAAGAACA AGGAGACAAA GCGCTCGCCG GGATCATCCT TGGGATCTTT GCGCTGGGGT CCTGCATCTC AGGGCTCGCC TACGGCGCCC GGCAATGGGC CTCCCCTGTC TGGTTACGTT TCCTCATTGG CATCATCGGG TTAGCCATCG GTGCCACCAT GTTCTTCTTC GCCACCACTG TGTGGGCACT CGCCGCCATC ATGTTCGTGA CCGGGCTGAC CATTTCTCCC ACCCTCATCA ACGTCAACAA CATGGTTCGG CTTGTGGTCA CGCCGCGGCA ACTCACCGAG GGACTCACCT GGGTGTCTAC GGCACTGGGG GTCGGGGTAG CCGCCGGTTC GTCACTGGCC GGTGCGCGCA TCGACGCTGG CGACGCCCAT GCCGGTTTCA CCGTGGTCAT CGCATCGGCA GCCCTGTCCG TGGTGGTCGC CATCGCAGCC CTCTCCACCA TTCGCACGCG CACCATGGCC CCAGAGCGGA TCATTGACGA ACTCACCGAA GACGACCTCC TTGAGGAGAT CAACACCACA CAGCTGGATG GCGGTCCTGA CGCAGAAGCT GGAAAAAACA GCGCACCCGC CCCTTAA
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Protein sequence | MTHPPSQPEA TRTSRNPYAT VLSHPGAARF SLAGALARSP MSMVGIGIVL MIKAAHNSYA LGGQVSAAYI IAQAICSPQL ARLVDAHGQA RVMRPAVIAT ATSLTLLVAT TVIGAPIALA FLFAITTGMS IGSVGAMVRA RWTHLITNPR ELHTAYSLEA AIDEMIFVIG PIIATFLATG VSYYAGLLVP IVLVLTGGLW FLSQRATEPP VLAPDPTSPA TSVLTNPAML ALIGVFIGVG GLFGATDVAT LAFAEEQGDK ALAGIILGIF ALGSCISGLA YGARQWASPV WLRFLIGIIG LAIGATMFFF ATTVWALAAI MFVTGLTISP TLINVNNMVR LVVTPRQLTE GLTWVSTALG VGVAAGSSLA GARIDAGDAH AGFTVVIASA ALSVVVAIAA LSTIRTRTMA PERIIDELTE DDLLEEINTT QLDGGPDAEA GKNSAPAP
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