Gene Jden_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0256 
Symbol 
ID8379451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp272115 
End bp273461 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content63% 
IMG OID645002990 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003160233 
Protein GI256831506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0048883 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACACC CACCCTCCCA GCCTGAGGCC ACCCGTACCT CACGCAACCC CTACGCCACC 
GTGCTTTCCC ACCCCGGAGC AGCACGCTTC TCCCTCGCCG GAGCACTCGC CCGTTCACCC
ATGTCTATGG TCGGAATCGG CATCGTCCTC ATGATCAAAG CCGCCCACAA CTCCTACGCC
CTCGGCGGAC AAGTCTCTGC GGCGTACATC ATCGCCCAAG CGATCTGCTC CCCCCAGCTA
GCCCGCCTCG TTGATGCACA CGGGCAAGCA CGTGTCATGC GGCCCGCCGT GATCGCCACA
GCAACCTCAC TCACCCTCCT GGTGGCCACC ACAGTCATAG GCGCCCCCAT TGCCTTAGCG
TTCCTCTTCG CCATCACCAC AGGGATGAGC ATCGGGTCAG TAGGCGCCAT GGTTCGGGCA
CGCTGGACCC ACCTCATCAC CAACCCCCGC GAACTACACA CCGCTTACTC CTTGGAAGCA
GCGATCGACG AAATGATCTT CGTCATCGGC CCCATCATCG CGACCTTCCT TGCCACCGGT
GTCAGCTACT ACGCCGGTCT CCTTGTTCCC ATCGTTCTCG TCCTGACCGG TGGGCTCTGG
TTCCTCAGCC AACGCGCCAC TGAACCGCCC GTCCTCGCCC CCGACCCCAC CAGCCCGGCC
ACCTCGGTCC TCACCAACCC TGCGATGCTC GCCCTCATCG GTGTGTTCAT TGGGGTAGGA
GGACTCTTCG GTGCTACTGA CGTCGCCACC CTCGCATTTG CAGAAGAACA AGGAGACAAA
GCGCTCGCCG GGATCATCCT TGGGATCTTT GCGCTGGGGT CCTGCATCTC AGGGCTCGCC
TACGGCGCCC GGCAATGGGC CTCCCCTGTC TGGTTACGTT TCCTCATTGG CATCATCGGG
TTAGCCATCG GTGCCACCAT GTTCTTCTTC GCCACCACTG TGTGGGCACT CGCCGCCATC
ATGTTCGTGA CCGGGCTGAC CATTTCTCCC ACCCTCATCA ACGTCAACAA CATGGTTCGG
CTTGTGGTCA CGCCGCGGCA ACTCACCGAG GGACTCACCT GGGTGTCTAC GGCACTGGGG
GTCGGGGTAG CCGCCGGTTC GTCACTGGCC GGTGCGCGCA TCGACGCTGG CGACGCCCAT
GCCGGTTTCA CCGTGGTCAT CGCATCGGCA GCCCTGTCCG TGGTGGTCGC CATCGCAGCC
CTCTCCACCA TTCGCACGCG CACCATGGCC CCAGAGCGGA TCATTGACGA ACTCACCGAA
GACGACCTCC TTGAGGAGAT CAACACCACA CAGCTGGATG GCGGTCCTGA CGCAGAAGCT
GGAAAAAACA GCGCACCCGC CCCTTAA
 
Protein sequence
MTHPPSQPEA TRTSRNPYAT VLSHPGAARF SLAGALARSP MSMVGIGIVL MIKAAHNSYA 
LGGQVSAAYI IAQAICSPQL ARLVDAHGQA RVMRPAVIAT ATSLTLLVAT TVIGAPIALA
FLFAITTGMS IGSVGAMVRA RWTHLITNPR ELHTAYSLEA AIDEMIFVIG PIIATFLATG
VSYYAGLLVP IVLVLTGGLW FLSQRATEPP VLAPDPTSPA TSVLTNPAML ALIGVFIGVG
GLFGATDVAT LAFAEEQGDK ALAGIILGIF ALGSCISGLA YGARQWASPV WLRFLIGIIG
LAIGATMFFF ATTVWALAAI MFVTGLTISP TLINVNNMVR LVVTPRQLTE GLTWVSTALG
VGVAAGSSLA GARIDAGDAH AGFTVVIASA ALSVVVAIAA LSTIRTRTMA PERIIDELTE
DDLLEEINTT QLDGGPDAEA GKNSAPAP