Gene Jden_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0228 
Symbol 
ID8379423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp242770 
End bp243744 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content47% 
IMG OID645002962 
ProductABC transporter related 
Protein accessionYP_003160205 
Protein GI256831478 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00487637 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CTGTTCTTAT TGCTAACGAT CTTAGACGAG AGTTTCGTTC AAAGGGGGAA 
AAGAAATCAA TCAACGCAGT TGATGGAGTC AACCTGCGTA TAGACCCTGG CGAAACGTTG
TGCTTACTTG GACCGAATGG GGCGGGAAAG ACAACTTCGA TAAAAATGAT ATCAACACTG
TTAATGCCTA CTGGAGGTGA AATAACAATT GATGGCATTA ACGCCGTGAA ATCTCCGCAG
GAAGCACGCT CGCGGCTCGG GTTGGTTCTA GGAGGAGAAC GTGGGTTTTA TCTTCGTGCA
ACAGCTAGGG ATAACCTACT CTTTTTCGCA GATATTCTGG ATGTTCCTCG TCGTGAGCGT
GCGCGTCGAG TCGATTATGC GTTAGATGCT GTCGCGCTAA CACATGTCAG TCGAAGTCCT
GTAGAAGAGT TCTCAAGAGG AATGCGTCAG CGATTGCATA TTGCTCGGGC GTTGCTTAAT
GAACCTAAAC TTCTACTTCT TGATGAACCA ACGGTTGGTT TGGACCCGGA GGCGGCCCGC
GACGTCAGAC AACTGGTGCG TGAATTGACT TCGACAGGAA CCGCGGTTCT GTTAACGACA
CACTATCTTT TTGAAGCTGA ACAGTTAGCG GACTCAATTG CACTTATCAT GAACGGAAAG
ATTGAGATCA CCGGCGATGT TGCGGCTATA GCAAAGCACT CAGGGATTAC AACCATCACC
ACGTTATCTC TCTCTGAGCT ACTAGATCGT GAATTGAAAG TGTTGCAGGC GATTAATGGT
CTGGGGCAAA TTAGAAGTGA AACTAGAGGA AATAGAACGT ATTTATACCT CCCCTGGGAG
GGTTTTCCTT ATGTTGAAAG AGTTTCTACA GTGCTCGAGG AATTGCGTGG TTCGGTCCCT
GAAGATTTCC ACACCCGTCC AGCTACCTTG GAGGAAAGCT ACCTCACGCT TGTGGACGAG
GTGGTGAATA TATGA
 
Protein sequence
MNKTVLIAND LRREFRSKGE KKSINAVDGV NLRIDPGETL CLLGPNGAGK TTSIKMISTL 
LMPTGGEITI DGINAVKSPQ EARSRLGLVL GGERGFYLRA TARDNLLFFA DILDVPRRER
ARRVDYALDA VALTHVSRSP VEEFSRGMRQ RLHIARALLN EPKLLLLDEP TVGLDPEAAR
DVRQLVRELT STGTAVLLTT HYLFEAEQLA DSIALIMNGK IEITGDVAAI AKHSGITTIT
TLSLSELLDR ELKVLQAING LGQIRSETRG NRTYLYLPWE GFPYVERVST VLEELRGSVP
EDFHTRPATL EESYLTLVDE VVNI