Gene Jden_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0196 
Symbol 
ID8379391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp211307 
End bp212905 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content58% 
IMG OID645002930 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003160173 
Protein GI256831446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.904476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC CCGCGCACCA TGCGCGCCGC TGGTGGGGGC TAGCGGCCAT TAGTTTCTCA 
GTTGCCCTGA TCATCATGGA TTCCACCATC GTATCGGTGG CAATCCCCTC CATCATCACT
GACCTGGGAA TTTCCACCAC CCAGGTGCAA TGGGTCCAAG AGATTTACAC ATTGGTGTTT
GCCGCGTTGC TTCTCGTGTG GGGGCGCATC GCAGACCGTG TGGGGCGGCG GCGGATCCTA
ATGATTGGTT TGATACTTTT TGGCGCATCG TCATTATGGT GTTCCAGTGC TGATTCCGGG
GGAATCCTCA TTCTCGCCCG AGCCGTGCAA GGCATTGGCG GGTCGATGAT TCTGCCCACA
ACTTTGTCGT TACTCAACAC CACCTTCACC GGGCGCGAGC GCACGATCGC GTTCGCTATC
TGGGGTTCCA CCATTGGCGG GATGGCGGCA GTAGGACCTG TTGTAGGCGG GTGGCTCACC
ACGTACCACA CATGGAATTG GGCCTTCTTG ATCAACGTTC CGCTCGTTGT GCTCATTGGT
GCAGCTGTGG TGTGGGCGGT CGCTGAGTCT CGCGACACCA GTGCTGAACG GCTCACCGAC
TGGGTGGGTG GCCTGTTGTC TATCGCCGGG TTTGGGGCTT TAGTGTTCGC CCTGATTGAA
GGTCGAGTGT ACGGTTGGTG GCTGGCAGCA CCAACTGCGA ATGTGTCCCT TGGATCATGG
TCGGTCATCC CGTTTGCGCT ACTGGGCGCA TTAGGGATCC TGAGCGTTTT TGTGTGGTGG
GAACACCGCC GCGCCCAGCA CGGGTTAAGC GTCATCGTTG ACCTATCGCT CTTCCAGATC
ACCTCATTCC GCAACGGAAA CATCACTGCG ATGGTGGTGT CGATGGGCGA GTTCGGGATC
ATCCTTTCAC TGCCGTTGTG GTTCCAGTAC GCCCTTGGTT TAGATGCTTT TGACGCCGGT
TTAGCGCTCA TCCCTTTGGC TGTCGGCTCG TTCCTTGCTT CTGGAGCGAT CTCAGCACTC
AGCAAGAAAC TCACACCGAT TGTCATGGTG CGTACCGGTT TAGTTTTGGA AATAGCCGGC
TTAACAGCGT TGGCCCTCCT ATTACGCCCT GACTCATCGC TGTGGCTCAC AACTACCACA
TTGTTCATCT ATGGTGTTGG AGTTGGGTTC GCCACCTCCC AACTGACTGC CACCATTTTG
GTGGACGTCC CACGCGACCG ATCAGGTCAA GGATCATCCA CCCAGTCCAC AGCCCGTCAA
GTAGGATCCG CACTCGGTAT CGCCGTTCTC GGCAGCGTCT TGTTCACAAC ACTCACAACA
GGAACCGAAT CCCGACTCTC TGAGTTCCTG GCATCCAACC CTGACGCCCA AGAACTCGTG
GACTCCATGA CACGATCATC AGGCGCACTC ATTCCGCAAC TCAGTGGAAA CCCAGCCACC
GCTCCAATCG CCGACGCTGC GCGCGAAGCC CTGACCCAGG GCGTCCAGTT CGCTGGAATC
ACCGCAGCGC TCGCACTACT GATCGGGTTG GCGACCAGCT TCCGGTTAGG CCCAACCCTC
CAGGTAACGC CAGAGGCGGG ACCAACTCGC GTGAGTTGA
 
Protein sequence
MNSPAHHARR WWGLAAISFS VALIIMDSTI VSVAIPSIIT DLGISTTQVQ WVQEIYTLVF 
AALLLVWGRI ADRVGRRRIL MIGLILFGAS SLWCSSADSG GILILARAVQ GIGGSMILPT
TLSLLNTTFT GRERTIAFAI WGSTIGGMAA VGPVVGGWLT TYHTWNWAFL INVPLVVLIG
AAVVWAVAES RDTSAERLTD WVGGLLSIAG FGALVFALIE GRVYGWWLAA PTANVSLGSW
SVIPFALLGA LGILSVFVWW EHRRAQHGLS VIVDLSLFQI TSFRNGNITA MVVSMGEFGI
ILSLPLWFQY ALGLDAFDAG LALIPLAVGS FLASGAISAL SKKLTPIVMV RTGLVLEIAG
LTALALLLRP DSSLWLTTTT LFIYGVGVGF ATSQLTATIL VDVPRDRSGQ GSSTQSTARQ
VGSALGIAVL GSVLFTTLTT GTESRLSEFL ASNPDAQELV DSMTRSSGAL IPQLSGNPAT
APIADAAREA LTQGVQFAGI TAALALLIGL ATSFRLGPTL QVTPEAGPTR VS