Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0196 |
Symbol | |
ID | 8379391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 211307 |
End bp | 212905 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645002930 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003160173 |
Protein GI | 256831446 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.904476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCTC CCGCGCACCA TGCGCGCCGC TGGTGGGGGC TAGCGGCCAT TAGTTTCTCA GTTGCCCTGA TCATCATGGA TTCCACCATC GTATCGGTGG CAATCCCCTC CATCATCACT GACCTGGGAA TTTCCACCAC CCAGGTGCAA TGGGTCCAAG AGATTTACAC ATTGGTGTTT GCCGCGTTGC TTCTCGTGTG GGGGCGCATC GCAGACCGTG TGGGGCGGCG GCGGATCCTA ATGATTGGTT TGATACTTTT TGGCGCATCG TCATTATGGT GTTCCAGTGC TGATTCCGGG GGAATCCTCA TTCTCGCCCG AGCCGTGCAA GGCATTGGCG GGTCGATGAT TCTGCCCACA ACTTTGTCGT TACTCAACAC CACCTTCACC GGGCGCGAGC GCACGATCGC GTTCGCTATC TGGGGTTCCA CCATTGGCGG GATGGCGGCA GTAGGACCTG TTGTAGGCGG GTGGCTCACC ACGTACCACA CATGGAATTG GGCCTTCTTG ATCAACGTTC CGCTCGTTGT GCTCATTGGT GCAGCTGTGG TGTGGGCGGT CGCTGAGTCT CGCGACACCA GTGCTGAACG GCTCACCGAC TGGGTGGGTG GCCTGTTGTC TATCGCCGGG TTTGGGGCTT TAGTGTTCGC CCTGATTGAA GGTCGAGTGT ACGGTTGGTG GCTGGCAGCA CCAACTGCGA ATGTGTCCCT TGGATCATGG TCGGTCATCC CGTTTGCGCT ACTGGGCGCA TTAGGGATCC TGAGCGTTTT TGTGTGGTGG GAACACCGCC GCGCCCAGCA CGGGTTAAGC GTCATCGTTG ACCTATCGCT CTTCCAGATC ACCTCATTCC GCAACGGAAA CATCACTGCG ATGGTGGTGT CGATGGGCGA GTTCGGGATC ATCCTTTCAC TGCCGTTGTG GTTCCAGTAC GCCCTTGGTT TAGATGCTTT TGACGCCGGT TTAGCGCTCA TCCCTTTGGC TGTCGGCTCG TTCCTTGCTT CTGGAGCGAT CTCAGCACTC AGCAAGAAAC TCACACCGAT TGTCATGGTG CGTACCGGTT TAGTTTTGGA AATAGCCGGC TTAACAGCGT TGGCCCTCCT ATTACGCCCT GACTCATCGC TGTGGCTCAC AACTACCACA TTGTTCATCT ATGGTGTTGG AGTTGGGTTC GCCACCTCCC AACTGACTGC CACCATTTTG GTGGACGTCC CACGCGACCG ATCAGGTCAA GGATCATCCA CCCAGTCCAC AGCCCGTCAA GTAGGATCCG CACTCGGTAT CGCCGTTCTC GGCAGCGTCT TGTTCACAAC ACTCACAACA GGAACCGAAT CCCGACTCTC TGAGTTCCTG GCATCCAACC CTGACGCCCA AGAACTCGTG GACTCCATGA CACGATCATC AGGCGCACTC ATTCCGCAAC TCAGTGGAAA CCCAGCCACC GCTCCAATCG CCGACGCTGC GCGCGAAGCC CTGACCCAGG GCGTCCAGTT CGCTGGAATC ACCGCAGCGC TCGCACTACT GATCGGGTTG GCGACCAGCT TCCGGTTAGG CCCAACCCTC CAGGTAACGC CAGAGGCGGG ACCAACTCGC GTGAGTTGA
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Protein sequence | MNSPAHHARR WWGLAAISFS VALIIMDSTI VSVAIPSIIT DLGISTTQVQ WVQEIYTLVF AALLLVWGRI ADRVGRRRIL MIGLILFGAS SLWCSSADSG GILILARAVQ GIGGSMILPT TLSLLNTTFT GRERTIAFAI WGSTIGGMAA VGPVVGGWLT TYHTWNWAFL INVPLVVLIG AAVVWAVAES RDTSAERLTD WVGGLLSIAG FGALVFALIE GRVYGWWLAA PTANVSLGSW SVIPFALLGA LGILSVFVWW EHRRAQHGLS VIVDLSLFQI TSFRNGNITA MVVSMGEFGI ILSLPLWFQY ALGLDAFDAG LALIPLAVGS FLASGAISAL SKKLTPIVMV RTGLVLEIAG LTALALLLRP DSSLWLTTTT LFIYGVGVGF ATSQLTATIL VDVPRDRSGQ GSSTQSTARQ VGSALGIAVL GSVLFTTLTT GTESRLSEFL ASNPDAQELV DSMTRSSGAL IPQLSGNPAT APIADAAREA LTQGVQFAGI TAALALLIGL ATSFRLGPTL QVTPEAGPTR VS
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