| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0146 |
|---|
| Symbol | |
|---|
| ID | 8379342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 157266 |
|---|
| End bp | 158522 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645002880 |
|---|
| Product | Arginine deiminase |
|---|
| Protein accession | YP_003160124 |
|---|
| Protein GI | 256831397 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2235] Arginine deiminase |
|---|
| TIGRFAM ID | [TIGR01078] arginine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.152156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT CGCAACGTCC AGCCCACACA TACGGTGTTC ATTCGGAGGT GGGGACGCTC
CGTAAAGTGC TGGTCTGTAG GCCCGGGCTC GCGCATCGGC GGCTCACCCC CACAAACTCC
AGTGACCTGC TGTTTGATGA CGTGCTGTGG GTTGACCGCG CCCAAGAAGA CCACGCGGCG
TTTGTGCGTT CTCTTGAGGC GCAGGGTGTG GACGTTGTTG AACTTCATGA CCTGCTTGCG
CAAACACTGA TTCAACCGGG TGGGCGGGAT TGGATTTTGG ACCGCAAAAT CACGGCGAAC
CTGGTGGGAA TCGGTTTGGT GGATTCGGTA CGCACCTACC TAGAAACCCT CCCTCCGCAG
CACCTCGCTG AGCACCTCAT TGGTGGGTTA TCCATTGACG ATGTGCCCGC TGAGTTCCGT
CCACCAACAA TGCTGTTGGT GCGCGGTTCC GCTGATGCCC GCGACTACTT AATGCCGCCC
TTGCCCAACA CGTTGTACAC ACGTGACACC ACCTGTTGGA TTTACGGCGG GGTCACGATG
AACCCGCTGT ACTGGCGTGC CCGTCACGAT GAAACGCTCC TGATGAAAGC GATCTACCTG
TTCCACCCAG ACTTCGTGGG TGCACACGTG TGGTGGGGTG ACCCGGAACA ACGCTGGGGG
CAAGCCACAC TTGAAGGTGG GGACGTGATG CCGGTGGGTG ATGGAGTGGT TCTCATTGGG
ATGAGTGAAC GCACGTCACG CCAAGCGATC ACCCAGGTCG CGGATACGCT GTTTCAGCGC
GGTGCAGCCG ACCAAGTCAT TGTTGCCGGG ATGCCTAAGC TACGGGCGGC TATGCACTTG
GACACGGTGT TTACGTTTGC TGACCGTGAC ATCGTCACCG TGTACCCACG GATTGTGGAT
TCCATTCACA CGTTCACGTT GCGCCCTGAT GGGCGCCCAG GCCGCTCGCA TGTCACTGAC
CATGGGCAGG GAACGTTCAT TAACGTTGTT GCTCAGGCGA TGGGCCTTGA CGGGTTGCGG
GTCATCAACA CTGGTGGTGA CGCCTACGAA TCAGAACGTC AACAGTGGGA CTCGGGTAAC
AACGCGGTCG CTGTGCGCCC AGGGGTGGTG TACACCTACG ACCGGAACAC GAAAACTAAT
GACCTCCTCA CCACAGCAGG TATTGAGGTG CTTCCTATTG TGGGTGCGGA GCTAGGGCGC
GGGCGCGGCG GTGGACACTG CATGACGTGC CCTCTTGTGC GTGACCCACT CGACTGA
|
|---|
| Protein sequence | MTESQRPAHT YGVHSEVGTL RKVLVCRPGL AHRRLTPTNS SDLLFDDVLW VDRAQEDHAA
FVRSLEAQGV DVVELHDLLA QTLIQPGGRD WILDRKITAN LVGIGLVDSV RTYLETLPPQ
HLAEHLIGGL SIDDVPAEFR PPTMLLVRGS ADARDYLMPP LPNTLYTRDT TCWIYGGVTM
NPLYWRARHD ETLLMKAIYL FHPDFVGAHV WWGDPEQRWG QATLEGGDVM PVGDGVVLIG
MSERTSRQAI TQVADTLFQR GAADQVIVAG MPKLRAAMHL DTVFTFADRD IVTVYPRIVD
SIHTFTLRPD GRPGRSHVTD HGQGTFINVV AQAMGLDGLR VINTGGDAYE SERQQWDSGN
NAVAVRPGVV YTYDRNTKTN DLLTTAGIEV LPIVGAELGR GRGGGHCMTC PLVRDPLD
|
|---|
| |