Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0096 |
Symbol | |
ID | 8379293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 105198 |
End bp | 107099 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645002831 |
Product | hypothetical protein |
Protein accession | YP_003160075 |
Protein GI | 256831348 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.176783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTTC TGCTGTCAAA GGTGGACCTG CCACCAGCCG TCGAGGCGGC ACTCAAAGCA GCTCCCAGCA TCACCGTTCC CCGCACCCGC GCGGAACTGT ACGAACTCTC TCTCGGACCA GACGGCGCCG ACACCTTCGA CGTGACATAC CAAGTCCCCG ATAACGGCGT GGTCACTGAG GCAACAGTTG TTCGTTGCAA AAACGGTATC GCCGTAAACT ACCCCGAAGA CTACATTCGC CGCCGTGACC CCAACTGCAT GCGGATCGCT GACGACCGCC CCACCGACAA GCCGCGGTTC AAAGACGTCC ACGGCTACGA CTTCGCCAGC GTCAAACAAG AAACCCTTGA CTGGCTTGCC ACCCAAGACC TCATCGTTGT TCCCTTCAAA GCAGGTGGCC TCACCTACGG TTCGCTGTCC CTAGCGATCG TGCCTGCGAA CACCGCATTC TTTGCGACCG CACTCGTTGA CCTCCAAGGC TGGGTCAGCA TCGAAGACGT TGAACCCTTC AGCCCCCGCT CCATCATGTA TGCGGCACCA CCCTTCCGTC ACACCCACTT TGACGGCAAA CAAATCGTCG TCCACGACCG CACCGAAACG CTCCACGAAA TCTTTGCCTA CAACCTCTAC CCAGGGCCGT CAGCAAAGAA AGGTGTCTTC TCTGCGCTCC TCGACATCGG TGAACAAGAA GGCTGGCTGA CCGCACACGC ATCATCCGTC CGGGTCACCA CCCCCTACGA CAACGAAACC GTCATCATGC ACGAAGGTGC ATCTGGTGGT GGAAAATCAG AAATGTGCCA AGACATCCGC CGCCAACCTG ACGGACGTAT CCTCCTGGGC ACCAACGTGG TCAGCAATGA GCCCTACTTC ATCAACCTTG GTGAATCCTC ACAGCTCGCA CCCGTCACCG ACGACATGAC TTTGTGCCAC ATCTCCCTGC AAACAGGTAA CGGCAAACTC ACCGTTGCTG ACGCAGAAGA CGGCTGGTTC GTCCGCGTGG ACAACATGAA AACCTACGGA GAAGACCCCA ACTTTGAGCG GGCGGTCATC CACCCCGACG AACCACTGGT GTTCTTCAAT ATCTCCGGTC TACCAGGTGC CACCTGCCTT CCGTGGGAAC ACGAACCAGA CTCCAACGGC AAACCATGCC CAAACCCGCG CGTGGTCATC CCCCGCCGAA TGATCCACGA CGTCGTGTCC GAACCCACCG AAATTGACGT CCGTACCTTC GGTGCGCGTA TGCCCGCGTG CACCCGCGAC AACCCCACCT ACGGGATCAT GGGGATGATG CACATCGTCC CACCAGCACT AGCCTGGCTG TGGCGTCTCA TTGCACCACG CGGAGACAAA AACCCCTCCA TTGGTGAGTC AGCAGAACAA ACAGACAAGC TCGCCCACGG TGGCCTCGTC TCCGAAGGTG TCGGTTCCTA CTGGCCGTTC TCCACTGGTA CCAAAGTTGC CGCAGCGAAC CTGCTCCTCA AGCAACTCAT GGACGCCGAC CGCACCCGCT ACGTGCTGAC CCCCAACCAG CACATCGGTG CCTACAAAGT GGGGTTCACC GCGGAATGGC TTACCCGTGA ATACCTGGCA CGTCGCGGCG GCGGAAAGAT CCGTCAAGAA CAACTCACAC CAGCCCGGTG TGCACTGTTC GGGTACGCCC TCAAAGAAGT CAAGATCGAC GGACAACTGA TCCGTCCCAC CTTCCTCCAA CCTGAAAACC AATCACAAGT TGGGTTCGAA GCGTACGACG CTGGAGCGAA AATCCTCACC GACTTCTTCA AAGCAGAACT CGCGCAATTC CTCACCGATG ACCTTGACCC ACTGGGCCGC GCCATCATCG AGGTGTGCAT GAAGGACGGA AGCCTTGAGG ACTACGAAGC GTTGACCTCG ACCTACCTGT AA
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Protein sequence | MELLLSKVDL PPAVEAALKA APSITVPRTR AELYELSLGP DGADTFDVTY QVPDNGVVTE ATVVRCKNGI AVNYPEDYIR RRDPNCMRIA DDRPTDKPRF KDVHGYDFAS VKQETLDWLA TQDLIVVPFK AGGLTYGSLS LAIVPANTAF FATALVDLQG WVSIEDVEPF SPRSIMYAAP PFRHTHFDGK QIVVHDRTET LHEIFAYNLY PGPSAKKGVF SALLDIGEQE GWLTAHASSV RVTTPYDNET VIMHEGASGG GKSEMCQDIR RQPDGRILLG TNVVSNEPYF INLGESSQLA PVTDDMTLCH ISLQTGNGKL TVADAEDGWF VRVDNMKTYG EDPNFERAVI HPDEPLVFFN ISGLPGATCL PWEHEPDSNG KPCPNPRVVI PRRMIHDVVS EPTEIDVRTF GARMPACTRD NPTYGIMGMM HIVPPALAWL WRLIAPRGDK NPSIGESAEQ TDKLAHGGLV SEGVGSYWPF STGTKVAAAN LLLKQLMDAD RTRYVLTPNQ HIGAYKVGFT AEWLTREYLA RRGGGKIRQE QLTPARCALF GYALKEVKID GQLIRPTFLQ PENQSQVGFE AYDAGAKILT DFFKAELAQF LTDDLDPLGR AIIEVCMKDG SLEDYEALTS TYL
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