Gene Jden_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0096 
Symbol 
ID8379293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp105198 
End bp107099 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content58% 
IMG OID645002831 
Producthypothetical protein 
Protein accessionYP_003160075 
Protein GI256831348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.176783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTTC TGCTGTCAAA GGTGGACCTG CCACCAGCCG TCGAGGCGGC ACTCAAAGCA 
GCTCCCAGCA TCACCGTTCC CCGCACCCGC GCGGAACTGT ACGAACTCTC TCTCGGACCA
GACGGCGCCG ACACCTTCGA CGTGACATAC CAAGTCCCCG ATAACGGCGT GGTCACTGAG
GCAACAGTTG TTCGTTGCAA AAACGGTATC GCCGTAAACT ACCCCGAAGA CTACATTCGC
CGCCGTGACC CCAACTGCAT GCGGATCGCT GACGACCGCC CCACCGACAA GCCGCGGTTC
AAAGACGTCC ACGGCTACGA CTTCGCCAGC GTCAAACAAG AAACCCTTGA CTGGCTTGCC
ACCCAAGACC TCATCGTTGT TCCCTTCAAA GCAGGTGGCC TCACCTACGG TTCGCTGTCC
CTAGCGATCG TGCCTGCGAA CACCGCATTC TTTGCGACCG CACTCGTTGA CCTCCAAGGC
TGGGTCAGCA TCGAAGACGT TGAACCCTTC AGCCCCCGCT CCATCATGTA TGCGGCACCA
CCCTTCCGTC ACACCCACTT TGACGGCAAA CAAATCGTCG TCCACGACCG CACCGAAACG
CTCCACGAAA TCTTTGCCTA CAACCTCTAC CCAGGGCCGT CAGCAAAGAA AGGTGTCTTC
TCTGCGCTCC TCGACATCGG TGAACAAGAA GGCTGGCTGA CCGCACACGC ATCATCCGTC
CGGGTCACCA CCCCCTACGA CAACGAAACC GTCATCATGC ACGAAGGTGC ATCTGGTGGT
GGAAAATCAG AAATGTGCCA AGACATCCGC CGCCAACCTG ACGGACGTAT CCTCCTGGGC
ACCAACGTGG TCAGCAATGA GCCCTACTTC ATCAACCTTG GTGAATCCTC ACAGCTCGCA
CCCGTCACCG ACGACATGAC TTTGTGCCAC ATCTCCCTGC AAACAGGTAA CGGCAAACTC
ACCGTTGCTG ACGCAGAAGA CGGCTGGTTC GTCCGCGTGG ACAACATGAA AACCTACGGA
GAAGACCCCA ACTTTGAGCG GGCGGTCATC CACCCCGACG AACCACTGGT GTTCTTCAAT
ATCTCCGGTC TACCAGGTGC CACCTGCCTT CCGTGGGAAC ACGAACCAGA CTCCAACGGC
AAACCATGCC CAAACCCGCG CGTGGTCATC CCCCGCCGAA TGATCCACGA CGTCGTGTCC
GAACCCACCG AAATTGACGT CCGTACCTTC GGTGCGCGTA TGCCCGCGTG CACCCGCGAC
AACCCCACCT ACGGGATCAT GGGGATGATG CACATCGTCC CACCAGCACT AGCCTGGCTG
TGGCGTCTCA TTGCACCACG CGGAGACAAA AACCCCTCCA TTGGTGAGTC AGCAGAACAA
ACAGACAAGC TCGCCCACGG TGGCCTCGTC TCCGAAGGTG TCGGTTCCTA CTGGCCGTTC
TCCACTGGTA CCAAAGTTGC CGCAGCGAAC CTGCTCCTCA AGCAACTCAT GGACGCCGAC
CGCACCCGCT ACGTGCTGAC CCCCAACCAG CACATCGGTG CCTACAAAGT GGGGTTCACC
GCGGAATGGC TTACCCGTGA ATACCTGGCA CGTCGCGGCG GCGGAAAGAT CCGTCAAGAA
CAACTCACAC CAGCCCGGTG TGCACTGTTC GGGTACGCCC TCAAAGAAGT CAAGATCGAC
GGACAACTGA TCCGTCCCAC CTTCCTCCAA CCTGAAAACC AATCACAAGT TGGGTTCGAA
GCGTACGACG CTGGAGCGAA AATCCTCACC GACTTCTTCA AAGCAGAACT CGCGCAATTC
CTCACCGATG ACCTTGACCC ACTGGGCCGC GCCATCATCG AGGTGTGCAT GAAGGACGGA
AGCCTTGAGG ACTACGAAGC GTTGACCTCG ACCTACCTGT AA
 
Protein sequence
MELLLSKVDL PPAVEAALKA APSITVPRTR AELYELSLGP DGADTFDVTY QVPDNGVVTE 
ATVVRCKNGI AVNYPEDYIR RRDPNCMRIA DDRPTDKPRF KDVHGYDFAS VKQETLDWLA
TQDLIVVPFK AGGLTYGSLS LAIVPANTAF FATALVDLQG WVSIEDVEPF SPRSIMYAAP
PFRHTHFDGK QIVVHDRTET LHEIFAYNLY PGPSAKKGVF SALLDIGEQE GWLTAHASSV
RVTTPYDNET VIMHEGASGG GKSEMCQDIR RQPDGRILLG TNVVSNEPYF INLGESSQLA
PVTDDMTLCH ISLQTGNGKL TVADAEDGWF VRVDNMKTYG EDPNFERAVI HPDEPLVFFN
ISGLPGATCL PWEHEPDSNG KPCPNPRVVI PRRMIHDVVS EPTEIDVRTF GARMPACTRD
NPTYGIMGMM HIVPPALAWL WRLIAPRGDK NPSIGESAEQ TDKLAHGGLV SEGVGSYWPF
STGTKVAAAN LLLKQLMDAD RTRYVLTPNQ HIGAYKVGFT AEWLTREYLA RRGGGKIRQE
QLTPARCALF GYALKEVKID GQLIRPTFLQ PENQSQVGFE AYDAGAKILT DFFKAELAQF
LTDDLDPLGR AIIEVCMKDG SLEDYEALTS TYL