Gene Jden_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0089 
Symbol 
ID8379286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand+ 
Start bp98587 
End bp99201 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content57% 
IMG OID645002824 
Producthypothetical protein 
Protein accessionYP_003160068 
Protein GI256831341 
COG category[S] Function unknown 
COG ID[COG4721] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0235527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.531775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCCC CTGCGTCACC GGCTGCATCT GCTCGCCGGG CACGCCCCAT TTTTCAGATG 
CGTGACATCG TTCTCATGGT GACCCTCGCC GTGGTTTTTG GGTTCCTGTA CTGGGTTCTG 
GTTCAGGCGT GGAATGTGTT AACCATCGCG ATGGGACCTG CCGGTGACTT GTCCCAACAC 
CTGTTGTTCG GTGGGTGGTT GATTGTTGCC CCTATTGCGT TGGCTATTAT CCGTCGCCCT 
GGGGTGGGGA TCATCGCGGA GATGGTGGCT GCAGCGATTG AAGTCTTTTT CTTGGGGTCA 
CCTATTGGCC CGACCTTGTT GATTGCGGCG TTCTTGCAAG GGTTTGGCAG TGAAGCTGCG 
TTCGCGATAA CCCGCTACCG CCGGTTTACG TGGGGTGTGT ATGCGGTGTC TGGGTTGTTG 
GGTGCGGCGA TTGTGTTCTT CTATTCGGCG TTTCGCTCTG GGTGGTTTGG GCAGGATATT 
TTCTGGTTGC GCTTCGCTAT TCAGTGCGGG TCTGGGGTCA TCCTTGGTGG GTTGTTGGCC 
AAGGTGATTG TTGATGCTCT TGTGCGCACC GGGGTGCTGA ACAATTACGC CATTGTGCGT 
GAGGCAGCGG TATGA
 
Protein sequence
MPAPASPAAS ARRARPIFQM RDIVLMVTLA VVFGFLYWVL VQAWNVLTIA MGPAGDLSQH 
LLFGGWLIVA PIALAIIRRP GVGIIAEMVA AAIEVFFLGS PIGPTLLIAA FLQGFGSEAA 
FAITRYRRFT WGVYAVSGLL GAAIVFFYSA FRSGWFGQDI FWLRFAIQCG SGVILGGLLA 
KVIVDALVRT GVLNNYAIVR EAAV