| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0051 |
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| Symbol | |
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| ID | 8379249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 58709 |
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| End bp | 60238 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645002787 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003160031 |
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| Protein GI | 256831304 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.241038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.50529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CATCGACAAT CCCCGCCAAA GCAACCACCC GGCAATGGGC TGCGCTCGCT
GCACTCATGA TTCCTGTGCT TCTCGTCTCC ATCGACAACA CGGTCCTGTC GTTCGCTTTG
CCCGAAATTT CGCGAAGCCT CCATCCCACC GGCACCCAAC TGTTGTGGAT CGTTGACGCC
TACCCGCTCA TCCTCGCTGG TCTCCTCGTT GCCATGGGAT CCCTTGGGGA CCGAGTCGGT
CGCCGCAAAC TCCTCCTCAT CGGGGCCATC GGGTTCGGTG CAGTATCCCT GTACGCAGCG
TTCTCCACCA CCCCCGAACA CCTCATCACC GCGCGCGCAT TACAGGGACT ATTCGGGGCA
ACCCTCATGC CTTCCACCCT CGCGTTACTG CGCAACATCT TCCTCGACGA CGTCCAACGC
CGACTCGCCA TCGCCATCTG GGCGTCCGGG TTCTCCGCCG GCGCGGCCCT TGGCCCCATC
GTCGGTGGGT GGCTCCTCGA ACACTACTGG TGGGGGTCCG TATTCCTCAT CAACGCCCCA
GTTCTCGCAG TACTCCTCAT CGCTGCTCCC CTACTCATCC CCGAATCACG GGACCCTCAA
CCTGGCGCAC TCGACATCAC CTCCATGGTC GCATCCGTCG CCACCATGTT CACCATCGTG
TACGGCATCA AAGCAGCCGC AACAGGCGAT GCGCTGGTCG CGATCACCGC GATCCTCACC
GGGTCCGCCA TCGGGTGGTG GTTTGTGCGC CGGCAAAACC GGCTCACCTC ACCCATGCTC
GACATGGCAC TGTTCCGCAA CCGGCTTTTC TCCGCCTCAG TACTCACCAA CCTCATGGCA
GTGGTTGCCA TGACCGGGAT GCTGTTCTAC GTCGCCCAGT ACGTGCAACT CGTCCTCGGC
TACAGTCCGT TCCAGTCCGG TCTGATTCTG CTGCCAGGGC TCGTCGCCAC CGTCATCGCC
GGACTAGTGG CAGTCAGACT GTCCCTCCAC TTCCCGCTAC GGGTGCTCAT CCCCACCGGG
TTGGCACTCT CAGCATCCGG GTTCGCAGTC GCCACCCAAC TGGGAGCCAA CACATCCGTG
TGGCTCCTCA TCGCAGCATT CGCCCTGGTC GGGCTTGGCT TAGGGCTCGC TGAGACGTTG
ACAAACGATG CGATCCTCGG GTCGGTTCCA CCCCACAAAG CCGGTGCAGC ATCGGGAATC
TCCGAAACCG CCTACGAACT CGGAGCACTC CTGGGAACAG CGATCCTCGG CAGCATCCTC
ACCGCGGTGT ACCGCACCCA GTTCGTCATC CCCCCAGGTG TCAGCGACAC CGACGCCGAG
GCGGCCCGTC AAACTCTGGG TGGTGCCGTG GACACGGCCG CCACGCTTCC CGACCCACTG
GGAACCGAAC TCCTCACCCA CGCGAAAGAA GCCTTCGCAC TGGGGGCTGA CACCACATCG
TTCGTCGGGC TCCTCATCAC CGCGACCGCA GCCACCATGA TGGCAATCGT GCTCCGCACA
CACAAAGGTC TTGCAGGCAC CCCACACTAA
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| Protein sequence | MTTASTIPAK ATTRQWAALA ALMIPVLLVS IDNTVLSFAL PEISRSLHPT GTQLLWIVDA
YPLILAGLLV AMGSLGDRVG RRKLLLIGAI GFGAVSLYAA FSTTPEHLIT ARALQGLFGA
TLMPSTLALL RNIFLDDVQR RLAIAIWASG FSAGAALGPI VGGWLLEHYW WGSVFLINAP
VLAVLLIAAP LLIPESRDPQ PGALDITSMV ASVATMFTIV YGIKAAATGD ALVAITAILT
GSAIGWWFVR RQNRLTSPML DMALFRNRLF SASVLTNLMA VVAMTGMLFY VAQYVQLVLG
YSPFQSGLIL LPGLVATVIA GLVAVRLSLH FPLRVLIPTG LALSASGFAV ATQLGANTSV
WLLIAAFALV GLGLGLAETL TNDAILGSVP PHKAGAASGI SETAYELGAL LGTAILGSIL
TAVYRTQFVI PPGVSDTDAE AARQTLGGAV DTAATLPDPL GTELLTHAKE AFALGADTTS
FVGLLITATA ATMMAIVLRT HKGLAGTPH
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