Gene Jden_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0021 
Symbol 
ID8379221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp22966 
End bp23403 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content60% 
IMG OID645002758 
ProductNrdI protein 
Protein accessionYP_003160003 
Protein GI256831276 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1780] Protein involved in ribonucleotide reduction 
TIGRFAM ID[TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.550333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCTG TGCGTCAGGT CCCTGTCTAC TTCTATTCGT CGAAGTCAGG CATGGTCCGG 
CAGTTCGCGA ACGCGTTGGG TCGACCCGTG TTCGATATTG GTGAACGTGA CGTGCGCCAG
TCGGTTCCTG ATGGCCCGTG GGTGTTACTC ACCCCGTCCT ACAAAACAGG GAACCTTGAC
AATGACACGA TCCCGGAGCC GGTGAAACGG TTTTTGCGTG ATCCTCAAAC CAGGCGCCGC
CTGGTTGGGG TCATGGGGTC GGGGAACCGC AACTTTGGGT CGCATTATCA GGCTGCTGCC
CGCGATATTG CCCGCCGTTC TGGGCGTCCG GTGCTGTTTG AGTTTGAACT CCAAGGAACG
CAGTGGGACG TGGAGGACGC ACGGGACATG TTGGAGCAGC TTGATGCCCG GTTCGCGGAG
CGTGCCGCTG CACAGTAG
 
Protein sequence
MVAVRQVPVY FYSSKSGMVR QFANALGRPV FDIGERDVRQ SVPDGPWVLL TPSYKTGNLD 
NDTIPEPVKR FLRDPQTRRR LVGVMGSGNR NFGSHYQAAA RDIARRSGRP VLFEFELQGT
QWDVEDARDM LEQLDARFAE RAAAQ