| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0012 |
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| Symbol | |
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| ID | 8379212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 12869 |
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| End bp | 14122 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645002749 |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003159994 |
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| Protein GI | 256831267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.577284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACT TTGATCACCG TCACACCAAC ACGCGCGTCC TCCTCCGCCA AGGAAACGCC
CCACTCACCA ACACCGACAT CACCATCGAA CACACCCAAC ACGCCTTCGG GTTCGGAAAC
ATCGGCTTTG AATTTGTGGA CTGGATCGCC GGCCCACCCA CCGGAGCTGT GGAACGTTCC
AACCACGTCC CCACCAACGA CATGGACGCT CTCGCCACCA AATGGCTTGA CGTGTTCAAC
ATGGCCACAT TGCCGTTCTA CTGGCGCCAC TTCGAGCCCG CACCCGGTCA CCCAGAAACT
GAACGCCTCA TGGCCACGGC ACGGTGGTTC ACCGAGAAAG GGGTCACCGT CAAAGGCCAC
CCACTGCTAT GGCATACACT CGCCCCACAG TGGCTGATGG ACCTCGACGA CGCCACCGTA
GAATCCACCA TCCGTGATCG CATCACCCGC GACGTCACCC AGTTCGCTGG AGTCATTGAC
CTGTGGGACG CCATCAACGA AGTGGTGATC CTTCCCGTGT TCACCGCCGA GGATAATGCC
GTCACTCGCC TTGCCCAGAA AAAGGGGCGA GTCGAGATGG TGCGTCTTGC CTTCGACACA
GCACAAGCAG CGAACCCGAA TGGGCGTTTT GTTCTTAACG ACTTTGACCT CAGCGAAGAC
TACGAGCACC TCATCGAAGA CTGTCTCGCA GCCGGGATCC GCATTGACGC TATTGGGTTG
CAAACACACA TGCACCAAGG ATTCCGTGGA GCAGAAGAGA TCTGGGACCG CATGGAACGG
TTCTCCCGTT TTGGGTTACC CCTCCAACTC ACCGAAACCA CACTGGTCTC CGGGGATCTC
ATGCCACCAC ACATCGTTGA CCTCAACGAC TACGTGGTCG ATGACTGGCC CACCACACCA
GAAGGCGAAG CCCGTCAAGC ACAAAACCTC ATCGACCACT ACACAGCAGT GTTCTCACAC
CCAGCCACCG AATCATTAAC GTACTGGGGC ATCACCGACC ATGGGGCATG GCTTGGCGCC
CCTTGCGGCC TCCTGCGTAA AGACGGCACC GCAAAACCTG GGTATGACGC AATCCATGAC
CTCATCACCC GGCAATGGAC GACCCCAACC ACCACCCAGC ACACGTCCAC CGATGGGGGA
GTGGACATCA CCGGTTTCGC GGGTACCTAC CGCATCACCA CCCCCCACGG AACAACCGAT
GTGACCCTGC CTGCAGGAAC ACACGACCCC GTTACTGTCA CCGTGGGAGA GTGA
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| Protein sequence | MSHFDHRHTN TRVLLRQGNA PLTNTDITIE HTQHAFGFGN IGFEFVDWIA GPPTGAVERS
NHVPTNDMDA LATKWLDVFN MATLPFYWRH FEPAPGHPET ERLMATARWF TEKGVTVKGH
PLLWHTLAPQ WLMDLDDATV ESTIRDRITR DVTQFAGVID LWDAINEVVI LPVFTAEDNA
VTRLAQKKGR VEMVRLAFDT AQAANPNGRF VLNDFDLSED YEHLIEDCLA AGIRIDAIGL
QTHMHQGFRG AEEIWDRMER FSRFGLPLQL TETTLVSGDL MPPHIVDLND YVVDDWPTTP
EGEARQAQNL IDHYTAVFSH PATESLTYWG ITDHGAWLGA PCGLLRKDGT AKPGYDAIHD
LITRQWTTPT TTQHTSTDGG VDITGFAGTY RITTPHGTTD VTLPAGTHDP VTVTVGE
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