| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0006 |
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| Symbol | |
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| ID | 8379206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 7495 |
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| End bp | 10110 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645002741 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_003159988 |
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| Protein GI | 256831261 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.307841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAAG ATCAGAACAT GGCCCAGGGT AACGCTGCTG ATGTGAGCGG CGTGGTCCAC
GGCAACATTG AGCAGGTTGA CCTGCAAACC GAAATGCAAC GGTCGTACCT CGACTATGCC
ATGTCGGTGA TCGTGGGCCG TGCTTTGCCT GAGGTTCGTG ACGGGTTAAA GCCTGTGCAC
CGCCGTGTCA TTTACGCGAT GTATGACGGC GGTTACCGAC CTGATCGCGC GTATTCGAAG
TGTTCACGTG TTGTTGGTGA CGTGATGGGG AAGTATCACC CGCACGGTGA CACAGCGATT
TATGACACGC TTGTTCGTTT GGTGCAGGAC TGGACGCTGC GTTACCCGCT CGCTGCCGGT
CAGGGGAACT TCGGGTCACC GGGGAATGAC CCTGCCGCTG CACCGCGTTA CACCGAAACG
CGTATGGCGC AGATCGCCAT GGAAATGGTG CGCGATATTG ACAAGAACAC TGTTGATTTT
CAGGACAACT ACGATGGGCG CACTCAGGAA CCAGCGGTGT TGCCCGCTCG TTTCCCGAAC
CTGTTGGTCA ACGGTTCTGC GGGTATTGCT GTGGGAATGG CCACGAATAT CCCGCCTCAT
AATTTGCGTG AGGTGGCTGA GGGTGTTGCC TGGTATTTGG CGAACCCCGA TGCCAGCCGT
GAAGAGTTGC GTGAGGCGCT GATCGCCCGG ATTAAGGGCC CAGACTTTCC CACTGGGGCG
ACCATTTTGG GTCGTTCCGG GATTGACGAT GCGTACCGTA CTGGCCGCGG GTCCATCACG
ATGCGTGCAG TGGTCAATGT GGAAGAAATT CAGGGACGCC AATGTTTGGT TGTCACCGAG
TTGCCGTATC AGGTGAACCC TGACAATCTC GCACTCAAGA TCGCTGACCT CACCAAAGAA
GGTCGTATTC AGGGAATCGC TGATATCCGC GACGAAACCT CTGGTCGTAC CGGTCAGCGC
CTTGTCATTG TGTTGAAACG TGACGCGGTG GCGAAGGTTG TGTTGAATAA CTTGTATAAG
CACACCCAGC TGCAGGAGAA CTTCTCCGCG AACATGCTTG CACTGGTTGA CGGTGTGCCA
CGGACGTTGT CGATTGACGC GTTCATTCAC CATTGGGTGA ACCACCAACT TGATGTGATT
TCTCGGCGTA CGGCGTTCTT GCTCAAAGAA GCTGAGGACA AGATCCACAT TTTGCGTGGT
TATTTGCGTG CGTTGGATAA TCTCGATGAG GTCATTGCGT TGATTCGCCG CTCCCCCACT
GTGGAGGAGG CCCGTGGCGG GTTGATTGAA TTGCTGGGTA TTGATGATAT TCAAGCAACA
GCGATTTTGA ACCTGCAGTT GCGTCGGCTT GCTGCGTTGG AGCGGCAAAA AATCATCGAT
GAACACGACG ATCTTGAACG TCAGATCCTG GATTACCGCG ATATTTTGGC AAGTCCACAG
CGCCAGCGTG ACATTGTGGG AAGTGAACTC AGTGAGATTG TGGACCGTTA CGGTGATGAG
CGCCGCTCCA CAATCCTTCC TTATGGCGGT GAGGTGTCCA TGGAGGACCT CATTGCTGAA
GAAGATGTGG TTGTCACCAT TACCCGCGGT GGTTACGTGA AGCGTACCCG TTCTGACAAC
TACCGGGCGC AAAAGCGTGG TGGTAAGGGT GTGCGTGGAA CACAGCTTCG TGAAGATGAC
ATTGTGGATC ATTTCTTTGT CACCACCACT CACCACTGGT TGTTGTTCTT CACGAACCTT
GGTCGGGTGT ATCGGGCGAA GGCGTATGAA CTACCAGAAG GATCACGTGA GTCCAAGGGG
CAGCATGTGG CGAACCTTCT TGCGTTCCAG CCAGGTGAAA GCATCGCCCA GGTCCTTGCG
CTTCGCAATT ACGAAGACCA CGAGTACCTT GTGTTGGCAA CCCGTTCCGG ACTAGTCAAG
AAGACCCGTT TATCTGAGTA TGACACCAAC CGGTCAGCCG GACTCATCGC TATTAAGCTC
CGCGAATACG ATGATGGAAG CGTTGATGAA CTGGTCAAGG CCATGCCCGT GAATGCGGAC
AATGACCTGA TTTTGATTTC CCGTTTGGGT CAGTCCATCC GGTTCACAGC TGACGATGCG
TCGCTTCGCC CGATGGGGAG GGGTACCTCT GGCGTCATCG GAATGAAATT CGCCGACGGG
GACGAACTCC TCTCGGCAGA CGTTGTCAAA GATGATGCTG ATCTCTTTGT GGTCACTGAC
GGTGGGTTTG CAAAACGAAC TGCGATCAGC GAATACCGAG TGCAGGGTCG AGGCGGCCAA
GGTGTCAAGG TTGCCAAGCT CGTGGAAGAC CGCGGTCACC TTGTCGGAGC ACTCATCACA
GAGCAAGATG ATGAAGTTCT TGTGATCATG GAGAAGGGAA AGATTGTGCG TTCTGCCGTT
GCGGAGGTTA ACCGTACCGG AAGGAACACA CAAGGTGTTA CCTTTGCCAA GCCAGACAAA
AAAGATCGCA TTATTGCTGT CGCCCGAAAC GTTGAACGAT CCCTGAACGA TGAGGACGAC
ACCGCTGAAG ACGGTGACGA GAACGATGTT CCGTTACCGG ACGCAGCAGT CCACGACACA
CCATCAGACG CTACAGCTGA AGAGAACAAC GCATGA
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| Protein sequence | MTEDQNMAQG NAADVSGVVH GNIEQVDLQT EMQRSYLDYA MSVIVGRALP EVRDGLKPVH
RRVIYAMYDG GYRPDRAYSK CSRVVGDVMG KYHPHGDTAI YDTLVRLVQD WTLRYPLAAG
QGNFGSPGND PAAAPRYTET RMAQIAMEMV RDIDKNTVDF QDNYDGRTQE PAVLPARFPN
LLVNGSAGIA VGMATNIPPH NLREVAEGVA WYLANPDASR EELREALIAR IKGPDFPTGA
TILGRSGIDD AYRTGRGSIT MRAVVNVEEI QGRQCLVVTE LPYQVNPDNL ALKIADLTKE
GRIQGIADIR DETSGRTGQR LVIVLKRDAV AKVVLNNLYK HTQLQENFSA NMLALVDGVP
RTLSIDAFIH HWVNHQLDVI SRRTAFLLKE AEDKIHILRG YLRALDNLDE VIALIRRSPT
VEEARGGLIE LLGIDDIQAT AILNLQLRRL AALERQKIID EHDDLERQIL DYRDILASPQ
RQRDIVGSEL SEIVDRYGDE RRSTILPYGG EVSMEDLIAE EDVVVTITRG GYVKRTRSDN
YRAQKRGGKG VRGTQLREDD IVDHFFVTTT HHWLLFFTNL GRVYRAKAYE LPEGSRESKG
QHVANLLAFQ PGESIAQVLA LRNYEDHEYL VLATRSGLVK KTRLSEYDTN RSAGLIAIKL
REYDDGSVDE LVKAMPVNAD NDLILISRLG QSIRFTADDA SLRPMGRGTS GVIGMKFADG
DELLSADVVK DDADLFVVTD GGFAKRTAIS EYRVQGRGGQ GVKVAKLVED RGHLVGALIT
EQDDEVLVIM EKGKIVRSAV AEVNRTGRNT QGVTFAKPDK KDRIIAVARN VERSLNDEDD
TAEDGDENDV PLPDAAVHDT PSDATAEENN A
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