| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_R0048 |
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| Symbol | |
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| ID | 3936461 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4079054 |
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| End bp | 4082437 |
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| Gene Length | 3384 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 640713036 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.770601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATCAAATCA AGCGCGAAAA GGGCGTTTGG TGAATGCCTT GGCAGTAAGA GGCGATGAAG
GACGTGATAC TCTGCGATAA GCTAGGGGGA GCCGAGAATA GGCTTTGATC CCTGGATTTC
CGAATGGGGC AACCCACCTG ACAGTTTTCC TATTATTACT TCGGTAATTA ATAGGTGGCT
GAGCCAGGTA TTTTTAGGCT GAATATATAG GCTTAAAAAA GCAAACCCGG GGAACTGAAA
CATCTAAGTA CCCGGAGGAA AGGACAGCAA TAGCGACTTC CCTAGTAGCG GCGAGCGAAC
GGGAACCAGC CGAGCCATGA ATGTGATCAG AAGGACCTGG AAAGGTCCGC CATAGTGGGT
GACAGCCCCG TATGAGAAGC ATGATTGGAC GTATCAAGTA GGGCGGGACA CGTGAAATCC
TGTCTGAAGA TCGGAGGACC ACCTTCGAAG GCTAAGTACT CCTTACTGAC CGATAGTGAA
CCAGTACCGT GAGGGAAAGG TGAAAAGCAC CCCGACGAGG GGAGTGAAAC AGTCCCTGAA
ACCGAACGCC TACAAGCAGT CGGAGCTTGA CTGGAGTTTA ATTTGGAGAT GAATAGAACG
CATGAAACGT TTTATTTTTC TCGCAGCGAT CTGGATCGCA CCCGCAACCG AAGCCCAACA
GGTTATCGGA GGCCTAGGGT GGGATGAAGA TGGCCATGGG ATCCATGGCA CCATCGAGTA
CAATGTAACC CCGTTCCACA GCACGAACCG CTTCCAAGCG GCGCTGGCAG TGGCGGCAAG
GATTGATCAA GATGGTGATG CATGGATCGG CGCCGGTGTT GCGCTGGAAC GACATCTCAG
CGAGCGTGTG TTCGTCGAGT TTTCGTTCAT GCCGGGCTAT TACCACGAAC AGGATGATGT
CCTGGGCGGG GCGTTGCAGT ACCGGTCGCT GATCGGGCTC GGGTATGACC TGAGCGAAAC
GTCGGCGATC TCAGTCTCGA TCGACCACCT GTCAAACGGT GGAGCCGAAG ACTTCAACCC
AGGATCAGAA GCCATAGCCA TCCGCTATCG CCTTCGGTTC TGACCTCCAA ATTAATCTCC
AGTCGGGTGA CGGCGTACCT TTTGTATAAT GGGTCATCGA CTTGGTCTCA CGAGCAAGCT
TAAGCCGTTA GGTGTAGGCG CAGCGAAAGC GAGTCTTAAT AGGGCGTTGA GTTCGTGGGA
TCAGACCCGA AACCGAGTGA TCTAGGCATG TCCAGGATGA AGGTAAGGTA ACACTTACTG
GAGGTCCGAA CCCACACCTG TTGAAAAAGG TCGGGATGAG GTGTGCCTAG GGGTGAAAGG
CCAATCAAAC TCGGAGATAG CTGGTTCTCC GCGAAATCTA TTTAGGTAGA GCGTCGACCG
AATACCACGG GGGGTAGAGC ACTGGATGGG TAATGGGGCC CCACAGGCTT ACTGATCCTA
ACCAAACTCC GAATACCCGT GAGTACTAGT CGGCAGACAC ACAGTGGATG CTAACGTCCA
TTGTGGAGAG GGAAACAACC CTGACCTCCA GCTAAGGCCC CTAATTCATG GCTAAGTGGG
AAAGCAGGTG GGACGACCAA AACAACCAGG AGGTTGGCTT AGAAGCAGCC ATCCTTTAAA
GATAGCGTAA CAGCTCACTG GTCTAAATAA GTTGTCCTGC GGCGAAGATG TATCGGGGCT
CAAGCCATGA GCCGAAGCTG AGGATGCACA TAGTGCATGG TAGCGGAGCG TAGTGTGACA
TAAGACTTAT CTTTATTACT GCACTAAGGG TGTGCGGGCA TTCGTGTCCA AGCAGTCGAT
AGGCGGTAGC AAAAGATACA GTCTTTTCTG TGAAGCCGGG GCGTGAGCCA TCCGGTGGAG
AGATCACTAG TGAGAATGAT GACATGAGTA GCGACAAACA GGGTGAGAGA CCCTGTCGCC
GAAAGTCCAA GGGTTCCTGC TTAAAGCTAA TCTGAGCAGG GTAAGCCGAC CCCTAAGGCG
AGGCCGAAAG GCGTAGTCGA TGGGAACCAG GTTAATATTC CTGGGCCAGC CAGTAGTGAC
GGTTCGTGAA GATTGTTCAC CCTTATTGGA TTGGGTGGGC CGTTAATCGG ATCCTGGAAA
TAGCTCTGGC ATAAGATCGT ACCCTAAACC GACACAGGTG GACTGGTAGA GAATACCAAG
GCGCTTGAGA GAACGATGTT GAAGGAACTC GGCAAAATAC CTCCGTAAGT TCGCGAGAAG
GAGGCCCAGT TTCTACGCAA GTATTGACTG GGGGCACAAA CCAGGGGGTG GCGACTGTTT
ACTAAAAACA CAGGGCTCTG CGAAGTCGCA AGACGACGTA TAGGGTCTGA CGCCTGCCCG
GTGCCTGAAG GTTAAAAGGA GAGGTGCAAG CCTTGAATTG AAGCCCAGGT AAACGGCGGC
CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC GACCTGCACG
AATGGCGTAA CGACTTCCCC GCTGTCTCCA ACATCGACTC AGCGAAATTG AATTGCCTGT
CAAGATGCAG GCTTCCCGCG GTTAGACGGA AAGACCCCGT GCACCTTTAC TACAGCTTCA
GACTGGTAAC AGGACTGGGA TGTGCAGGAT AGGTGGTAGG CTTTGAAGCA GGAACGCTAG
TTTCTGTGGA GCCATCCTTG AGATACCACC CTTCGCATTC TTGTTATCTA ACCGCGGTCC
GTTATCCGGA TCCGGGACCC TCTGTGGCGG GTAGTTTGAC TGGGGCGGTC GCCTCCTAAA
GAGTAACGGA GGCGCGCGAA GGTTGGCTCA GAGCGGTCGG AAATCGCTCG TTGAGTGCAA
TGGCAGAAGC CAGCCTGACT GCGAGACTGA CAAGTCGAGC AGAGTCGAAA GACGGCCATA
GTGATCCGGT GGTCCCGAGT GGAAGGGCCA TCGCTCAACG GATAAAAGGT ACGCCGGGGA
TAACAGGCTG ATGGTGCCCA AGAGTCCATA TCGACGGCAC CGTTTGGCAC CTCGATGTCG
GCTCATCTCA TCCTGGGGCT GGAGCAGGTC CCAAGGGTAC GGCTGTTCGC CGTTTAAAGA
GGTACGTGAG CTGGGTTTAG AACGTCGTGA GACAGTTCGG TCCCTATCTG CCGTGGGTGT
AGGATACTTG AGAGGAGTTG CCCCTAGTAC GAGAGGACCG GGGTGAACGA TCCACTGGTG
TACCAGTTGT TCCGCCAGGA GCAGTGCTGG GTAGCTATGA TCGGAAAGGA TAACCGCTGA
AGGCATCTAA GCGGGAAGCC CCCCTCAAAA CAAGGTATCC CTGAGAACCG AGGTAGACCA
CCTCGTCGAT AGGCCAGAGA TGTAAGCGTG GTAACACGCT CAGTTGACTG GTACTAATTG
TTCGATAGGC TTGATTTGAT CCAG
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| Protein sequence | |
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