| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4244 |
|---|
| Symbol | |
|---|
| ID | 3932396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | + |
|---|
| Start bp | 32883 |
|---|
| End bp | 34136 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637902301 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_512184 |
|---|
| Protein GI | 89057730 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.772955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGATA TTTACAACGG CGGCTCGAAC TACATGATTC ACTACATGAC ACCGAAAGGC
GTCGGCGATG CTTGGGTCGG GAACGAATTG CGCGTCATGC AGAAAGCGGA GATACCGTTT
GTATTGCACG CCCTGAACCA CCCTGACCAA ACGTATTTTT CTTCTGATGA TATCGCCACA
CTGGAGAGCG CCACGAACTA TATTTATCCT CTGCGCCAGT GGGTTGCCCT TTGGGCTATT
CTGATGGCCC CGTTCCGCTT TGGGAGGCGA TTTTTTTCCT CTCTTGCCAA TGCGTTGGTG
GGTCCGAGCG AATCGTTTCG CAACCGCGCT GTGGGCCTGT GGCATTTCGC ACTGGCCTGC
CATTGGGCCG CCGGGCTCCG CGCGTCGCCG CCGGTCCATA TCCACTCGCA ATGGATCCAT
TCCGCCGGGA CCGTGGCCAT GTATGGGGCC TGGCTTCTGG ACCGGCCCTT CAGCTTCACC
GGCCATGCCG CCGATCTGTT CCGCAACCGA CAGGCCCTGG ATACCAAGAT CGCGCGGGCC
GAGTTCATCA TCTGCATCTC GGAATTTCAC CGGCAGTTCT ACCTGGAAAA CGGCGCGGAT
CCTGCGCAGC TTCACATCGC CTATTGCGGC ATCGACACCA GTCATTTCAC CCCACGCCGC
CGCCCCCGTG ACCGCACGCG GCCCTACCAT ATCCTGTCGT CGGGCCGGCT GGTCGAGAAG
AAGGGCTTTG CCGATCTGAT CCGGACCTGT GTGATCCTGC GGGACCGGGG GCTTGATTAT
CGCTGCACCA TCGCAGGCTC TGGCCCCGAT GAAGGCGTGT TGCGCGCCCA GATCGCACAA
TCCGGGCTGG AGGATCTGGT GACCCTGACC GGTGAGGCCC TGAAGCAGGA AGATATCCCC
GATTTCATGG CCACCGGTGA TGTCTATACG CTCCCCTGTA TCTGGGCCTC CGACAATGAT
GTCGACGGGT TGCCGCAGAT GCTGATGGAG GCGATGGCCT GCGGATTGCC TGCCATATCG
ACCCGGCTGG TTGGTATTCC CGACCTGATC CACGATGGGG AGACGGGTCT TCTGGTGGAC
CCCAATGACC CGGAAGCCCT GGCCGATGCC CTGATGCGGC TGGAGTCTGA TACGGTTTTT
GCGGATGATT TGTCTCAAGC CGGATATCGC CATTTGGTCG ACACATTCGA TCTCGATAGA
TGCCTCGAAC CCCTTCTCGA AAAATTTCGC GCCAGCCTGG AGGCTGCAAA ATGA
|
|---|
| Protein sequence | MSDIYNGGSN YMIHYMTPKG VGDAWVGNEL RVMQKAEIPF VLHALNHPDQ TYFSSDDIAT
LESATNYIYP LRQWVALWAI LMAPFRFGRR FFSSLANALV GPSESFRNRA VGLWHFALAC
HWAAGLRASP PVHIHSQWIH SAGTVAMYGA WLLDRPFSFT GHAADLFRNR QALDTKIARA
EFIICISEFH RQFYLENGAD PAQLHIAYCG IDTSHFTPRR RPRDRTRPYH ILSSGRLVEK
KGFADLIRTC VILRDRGLDY RCTIAGSGPD EGVLRAQIAQ SGLEDLVTLT GEALKQEDIP
DFMATGDVYT LPCIWASDND VDGLPQMLME AMACGLPAIS TRLVGIPDLI HDGETGLLVD
PNDPEALADA LMRLESDTVF ADDLSQAGYR HLVDTFDLDR CLEPLLEKFR ASLEAAK
|
|---|
| |