Gene Jann_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4200 
Symbol 
ID3936689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4306028 
End bp4306825 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID637906586 
Productflagellar protein, putative 
Protein accessionYP_512142 
Protein GI89056691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.628591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTA CGCCTGTTAT TCCCCTAGGC GGTTATGCGG GTTGGAAAGT GTTGCAATCG 
ACATTGGACG TGCAGCAAAC TCGGTTCGCG GAAGATCCCG TGCAAAGCCG CGACCGAGAG
TATTTTAGGG AGAACATCGG CGCGGTCTCA TCTGCCGAGG ACCTTGTAGG CGATTATCGG
CTTCTGCGCG TCGCGCTCGG TGCTTTCGGC TTGCAGGATG ATCTGCCCAA TCGCGCCTTC
GTCGAAAAAG TGCTGTCGGA TGGTGTGTTA GACGACGACG CGTTGTCCAA TAAGCTGGCT
GACAAGACCT ATCGCGCGTT CGCGGAAGCA TTTGGCTTCG GGAGCCCATT ACCGCCTTTG
ACCCAGGGCC CGGGGTTTGC GGACAAAATC CTGGCGCGAT TTGATGAACA AGCATTTGAA
GTTGCGGTGG GTGAGCAAGA CACGGACATG CGTCTGGCGT TGGAGGCCAC GCGGGAGGTT
CCGGGAATTG CATCGGCAGA TACGTCAGAT ACGACCGCGT GGCTGACTGT TCTGGGCAAG
CCCTCCTTGC GCCAAGTGTT CGAGACTGCT TTCGCGCTAC CCAGTTCTAT CGGGACGCTG
GATCTCGACA AGCAGCTGGA TGCCTTTCGC GGCGGAGCAG AACGCGTCCT GGGCTCGTCA
GAGTTTGCCG CGCTGCAGGA CCCCACTGTG GTAGAGGACT TGGTGCAGGC CTTTACCTTG
CAGTCCCAGG CGGCCGCGGG TCCTTCGGCG CTGACCCGCG GTGCAAGTGC AGTTATTTTG
CTGCAAAACC TCGTCTGA
 
Protein sequence
MTFTPVIPLG GYAGWKVLQS TLDVQQTRFA EDPVQSRDRE YFRENIGAVS SAEDLVGDYR 
LLRVALGAFG LQDDLPNRAF VEKVLSDGVL DDDALSNKLA DKTYRAFAEA FGFGSPLPPL
TQGPGFADKI LARFDEQAFE VAVGEQDTDM RLALEATREV PGIASADTSD TTAWLTVLGK
PSLRQVFETA FALPSSIGTL DLDKQLDAFR GGAERVLGSS EFAALQDPTV VEDLVQAFTL
QSQAAAGPSA LTRGASAVIL LQNLV