| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4199 |
|---|
| Symbol | |
|---|
| ID | 3936688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4304676 |
|---|
| End bp | 4305998 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637906585 |
|---|
| Product | ATPase FliI/YscN |
|---|
| Protein accession | YP_512141 |
|---|
| Protein GI | 89056690 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG CTTTCGACCT CCTGCGCGCG CAACTACGTG GCATCAAAAC GGCTCAGGCG
GTGGGCAAAA TCTCCGCTAT GGGGCGCGAT GTCGTGTCTG TATCGGGCTT GGACCGAGTC
GCGTCCCTGG GTGATCGTGT CCGGTTCAAT GCCGATGCGA CAGGAGAAAT TCTCGCCATG
GAAGCCGGTC GCGCCCGTGT CATGCCGGAT GGGCCCGCCG ATGGCCTGCG TTTGGGCGCA
GACGTGACCC ACCTGGGGCC CGCAAGTATC TCACCCGATG ACAGCTGGCT TGGCCGTGTG
ATTGACCCCG ACGGGCAGCC ATTGGATGGT CGAGCGATTT TGCCGGGTCC AGTCGCGTAT
CCTTTGGTCT CACCGCCACC ATCCCCCGCT GCCCGCCGTG GCTTGGGTGC ACGCCTTCAA
ACGGGATTCG CAGTTTTCGA TACTCTGTTG CCCATCGTGC GCGGGCAGCG GGTGGGGCTT
TTCGCCGGAT CTGGAGTCGG CAAGTCACGC CTGACGGCGG CCTTGGCGGA CGGAATGGCC
GCCGATGTCG TGGTAATCGG TCTGATTGGA GAGCGGGGTC GCGAGGTCCG GGATTTCGTG
AGCGAAACCC TTGGACCCGA GGGGCTGGCC CGCTCCGTGG TCATTGCCGC CACCTCGGAC
CGCCCGGCTC TGACCCGCGC GAGGGCCGCA TATACGATGA TGGCAGTCGC GGAATTCTTC
CGAAATCAGG GGCGCAATGT CATTGTGCTG GCTGATTCCA TCACCCGGTT TGCCGAGGCA
CAACGCGATG TTGCTGCCGC GGCAGGGGAA CCTTTCGGCC CCAGCGGTTT CCCGGCGTCG
ATGGCGCAAA CGATAATGGC GTTGGCTGAA CGCGCCGGAC CAGGATCGGG AACGCAAGGG
GACATTACCG CGATTTTTTC AGTCCTGGTT GCAGGATCTG ACATGGACGG ACCGGTGGCA
GACGTCATGC GCGGGACCTT GGATGGGCAT ATCGTGCTAA CCCGCGAGAT CGCCGAACGT
GGTCGATACC CGGCGATTGA TCTCTTGCGC TCAGTCAGCC GATCCCTGCC CAACGCGGCA
TCAGATGAGG AAAACAGGAT GATCTTGCGC GCGCGCCAAT TGATGGGCGC ATATGATCGC
GCTGAAATGA TGCTGCAGGC TGGATTGTAC ACGCCAGGTG CGGACCCGTT GACGGACGGC
GCAGTCAAAG TCTGGGCCGA TCTGGACGCC TTTGTTGGCT GCACCGCCGC TGTCGACATA
GGGCAGAGCT TCAATGATTT GCGCAAGGTA CTATCCGCCG CCGACGTTCC TGGGGGCAAA
TAG
|
|---|
| Protein sequence | MSDAFDLLRA QLRGIKTAQA VGKISAMGRD VVSVSGLDRV ASLGDRVRFN ADATGEILAM
EAGRARVMPD GPADGLRLGA DVTHLGPASI SPDDSWLGRV IDPDGQPLDG RAILPGPVAY
PLVSPPPSPA ARRGLGARLQ TGFAVFDTLL PIVRGQRVGL FAGSGVGKSR LTAALADGMA
ADVVVIGLIG ERGREVRDFV SETLGPEGLA RSVVIAATSD RPALTRARAA YTMMAVAEFF
RNQGRNVIVL ADSITRFAEA QRDVAAAAGE PFGPSGFPAS MAQTIMALAE RAGPGSGTQG
DITAIFSVLV AGSDMDGPVA DVMRGTLDGH IVLTREIAER GRYPAIDLLR SVSRSLPNAA
SDEENRMILR ARQLMGAYDR AEMMLQAGLY TPGADPLTDG AVKVWADLDA FVGCTAAVDI
GQSFNDLRKV LSAADVPGGK
|
|---|
| |