Gene Jann_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4188 
SymbolflhB 
ID3936677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4298546 
End bp4299634 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID637906574 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_512130 
Protein GI89056679 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGACACAAG CCCTGGTGAC AAGCCGTTTG ACGCGACACC CAAGAAGCTT 
GAGGACGCGC GCAAGAAGGG TGAAATCGTC CGATCGCAAG ATCTCAACAC AGCCGTTATG
TATGCCGGGT TTTTGCTGTC TGGCGCGATT CTAGCTCCTT GGCTGGTGCA AAACCTGGGG
CAACTGACCC AAACCACACT TGGCCAAGCA GAGGTGATAG CCCCCCTCAT GCTAGGACCG
GGCGGCGATG GGCCCGCAAT CGGGCTTCTA TCCGGATCTC TTATTGCGTC AGCAGCAATC
GTCCTGGTCC CTGCAGGGCT CTTGCTGATC TCGCTTCTCG CCCAACGTGC ATTGCTCTTC
ACGCCTTCGA AATTGATGCC GAAGCTCAAC CGGTTGTCAC CCATCAGCAA TGCAAAACAG
AAATACGGAT CGCAGGGATT GTTCCAATTC GCCAAATCAG CCGTGAAACT TGCGCTCGTT
TCGATCTTCT TGGCAATTTA TCTGTGGGCT CGAGCGGAGA CTATCCTCGC CTCGCTATAC
GGCACGGCGG GGCAGTTGTT GGAGCTTTTG GGCCGCTTGT CGCTGGATTT TCTGATGGTC
GTCGCAGGCA TGACCGGCAT TATCGGTATC ATCGACTGGT TCTGGGAATG GAGCCAGCTT
CAGCTGCGCA ATCGCATGAC CCGGCAAGAA GTCATGGATG AGTCCAAATC CGCGGAGGGC
GATCCTCACA TCAAGCAGCA GCGGCGCGCG CGCGGCCAAG GTATCGCGAT GAACCAAATG
CTTGGAGATG TGCCAAACGC TGATGTGGTG GTTGTGAACC CGACCCACTA CGCGGTTGCC
TTGAAGTGGG ATCGCGCAGG CGGAGGAGTC CCAATTTGCG TGGCCAAAGG CGTCGATGAC
GTCGCTCGCC GCATTCGTGA AGCTGCATCT GAGGCCGCCG TTCCGATTTT TTCGGATCCG
CCGACAGCCC GGGCACTTCA TGCAAGCATA GAAGTTGGGG CGGCCATTCA GCCGGATCAA
TACCGCGCCG TTGCGGCCGC CATTCGCTTT GCGGATCTGA TGCGTTCCAA AGCGGTCGCC
CGGGCATGA
 
Protein sequence
MSDDDTSPGD KPFDATPKKL EDARKKGEIV RSQDLNTAVM YAGFLLSGAI LAPWLVQNLG 
QLTQTTLGQA EVIAPLMLGP GGDGPAIGLL SGSLIASAAI VLVPAGLLLI SLLAQRALLF
TPSKLMPKLN RLSPISNAKQ KYGSQGLFQF AKSAVKLALV SIFLAIYLWA RAETILASLY
GTAGQLLELL GRLSLDFLMV VAGMTGIIGI IDWFWEWSQL QLRNRMTRQE VMDESKSAEG
DPHIKQQRRA RGQGIAMNQM LGDVPNADVV VVNPTHYAVA LKWDRAGGGV PICVAKGVDD
VARRIREAAS EAAVPIFSDP PTARALHASI EVGAAIQPDQ YRAVAAAIRF ADLMRSKAVA
RA