| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4171 |
|---|
| Symbol | |
|---|
| ID | 3936660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4279670 |
|---|
| End bp | 4280572 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637906557 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_512113 |
|---|
| Protein GI | 89056662 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAG ATATGCACAA CGCCCTGCGC GTGGTCGGTC AACCGCTATC CTTCAAAGGC
GGCGATACGT TACGCCAGAA AGGTACTTTT GCCCCCGATA TGCTGTTGAT CCTCACCGGT
CAGGTCGACT GTGTCCTGTC CGAGGAGGAT GCAGTCCATC TGCCTGTCGG TCCTGGTACA
ATCGTGGGTG AAATCGGCTC TCTCACCGGT CAGGCAGCGA CGGCCACCTT GCGGGCTGTG
GGACCGGTTG AGACCCTCTC GCTGGACGCG CGCGCCCTGC AACGGCTCCA ACAGGAGGCA
CCGAAAGTGG CGTCCGACAT CCTGCGCCAC CTCACGCATC TGCTTCGAGA CAGGTCCGTT
CAAAACCAAG ACTTGTTGGC TGAAAGCACT GGAGAGGCAG CCGACGCCAT TACCGTCGTT
CGCTGTTCCA CCCTCGACCA GATGCGCACG GCGCAGAGAG TTCACTACGA TGTTCATTGT
CTGGAAAACG GCCGCGACTC CGCCCTTGCG GATCACGAGG AGGGCATCAT CATTGATGAT
CTGGGCCAAG CGGGCACGAC GTTCATCGCG TATACGGGGG TGCAGGTCAT TGGCATGATG
CGCGTGCACT CAGGCGCGGA TTGTGACGAA GATGTTCGGC GCTTGCATGG CGCGCATCTG
ACGGACACAC GTGCTGTCAT CACCACCACC GCGTTGCACG ACGCCTATGT GTCCGACGAT
GTTCTGAGTG ACTTCCTCGG TGCGATCCTC ACTTTTACAA CTGTGTCCGG CGCTGATGCG
TTGCTCGTTC ATTGCCCGAT GAACCACGAG GCGCGCTATC TGGCACGCGG CTTTGTCCGC
ACCGGCCCTG ACGTCGTCTT GGATGAAATC GGCCCTTCTG TCCCGATGAT CCTGCGCGTT
TGA
|
|---|
| Protein sequence | MTPDMHNALR VVGQPLSFKG GDTLRQKGTF APDMLLILTG QVDCVLSEED AVHLPVGPGT
IVGEIGSLTG QAATATLRAV GPVETLSLDA RALQRLQQEA PKVASDILRH LTHLLRDRSV
QNQDLLAEST GEAADAITVV RCSTLDQMRT AQRVHYDVHC LENGRDSALA DHEEGIIIDD
LGQAGTTFIA YTGVQVIGMM RVHSGADCDE DVRRLHGAHL TDTRAVITTT ALHDAYVSDD
VLSDFLGAIL TFTTVSGADA LLVHCPMNHE ARYLARGFVR TGPDVVLDEI GPSVPMILRV
|
|---|
| |