| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4153 |
|---|
| Symbol | |
|---|
| ID | 3936642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4265152 |
|---|
| End bp | 4265751 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906539 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_512095 |
|---|
| Protein GI | 89056644 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.428897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAG AGATTCGGAA GATCGTCACC TATGATGAGG AGGTCTTGAT CGAAGGCTTC
CGCAAAGCCG ATGCACCCTG GCGCATGTTC GCAATTGCCT GCGTGGTGCG GAACCCCTGG
GCGGGTCGTT TCGTGGAGGA TCTTAAGCCC GAGATCATGG CCTATGGCCC CGTTTTGGGG
GAACTGATGA CCGAGCGCAT GATCACGCTG GCAGGCTCTG GCGATGCGAT TGAAGCCTAC
GGCAAGGCCG CAATCGTCGG CGTGGACGGA GAGGTGGAGC ATGCCTCCGG CCTGATCCAC
ACGTTGCGGT TCGGGAACTT TTTCCGGGAG GCGGTCGGCG CGAATTCGTA CCTCGCCTTC
ACCAACACCC GCGGCCCGGC CAATGCACCG ATCATGGTGC CGCTGATGGA CAAGAATGAC
GCCGGGCGCA GGTCCCATTA CCTGACGATC CAGTTTGCGA TCCCCGATGC CCCCCGCGCG
GACGAGATCG TCGTTTTGCT GGGGGCGGCG ACGTCCGGAA GGCCCCATCA CCGCATCGGC
GACCGTTACC AAGACCTCAA GGACCTGGGC CATGACCTGG ACAACCCGGC CGCGGTCTGA
|
|---|
| Protein sequence | MQPEIRKIVT YDEEVLIEGF RKADAPWRMF AIACVVRNPW AGRFVEDLKP EIMAYGPVLG
ELMTERMITL AGSGDAIEAY GKAAIVGVDG EVEHASGLIH TLRFGNFFRE AVGANSYLAF
TNTRGPANAP IMVPLMDKND AGRRSHYLTI QFAIPDAPRA DEIVVLLGAA TSGRPHHRIG
DRYQDLKDLG HDLDNPAAV
|
|---|
| |