| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4131 |
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| Symbol | |
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| ID | 3936620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4240526 |
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| End bp | 4241539 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906517 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_512073 |
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| Protein GI | 89056622 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCTG AGGCCCCGCT TCTGGAAGTC ACGGACCTTC AGACCACATT CGACATTACC
AAAAAGCTCT CCATCCGGGC CGTCGATGGG GTCAGCTTTT CCGTGAATGC CGGAGAGACG
CTGGCCATTG TGGGTGAAAG CGGGTCCGGG AAATCGGTGA CGAGCCTGTC GATCATGGGG
TTGCTGCCGA AGGACGTGGG CCGTGTGTCA GGCGGCAGCA TCAAGCTGCA TGGCCGCGAT
ATCACCAACC TGTCTGAGCC GGAAATGCGA GAAATCCGCG GCAAGGAGAT CGGCATGATC
TTCCAGGAGC CGATGACCAG CCTGAACCCA GTGCACACTG TCGGGCAGCA GATCGCAGAG
ATGGCGATCC GGCATGAGGG GCTGTCGCCA TCCAAGGCTC GCACCCGCGC AATAGAGATG
CTGGACCTCG TGGGCATCCC CGAGCCCGCC ACGCGGGTGG ACAATTACCC CCACCAGATG
TCGGGCGGTA TGCGGCAGCG GGCGATGATC GCCATGGCGC TGGCGTGCGA GCCGCGCATC
CTGATCGCTG ACGAGCCGAC AACCGCGTTG GATGTGACCA TTCAGGCGCA GATGCTGGAG
CTGATGCAGG ACCTGCAAGA CAAGCTCGGC ATGGCGATCA TCTTTATCAC CCATGATCTG
GGGGTTGTGG CCGAAGTCGC CGACCGCGTC GTTGTCATGT ACGCGGCCCA AGTCGTTGAG
ACGGCGGGTG TGGAAGATAT CTTCGAGACG CCACGCATGC CCTATACCGC CGGGTTGATG
AATTCGATCC CGCGCCTGGG ATCGTCGGTC AACAAGGTGC GGCTTGAGGC CATCCCCGGC
AGCGTGCCCG CCCTGACCAA TCTGCCCGAC GGCTGCCGCT TCAATCCCCG CTGCGCTTTC
GCGACGGATG AATGTCGCGC GACAGAGCCT ACACTGGATG CCGCAAGCGC GGGCCACATG
ATCCGCTGCG CCCGGTGGCA GGAGCTGTCG CTTGCCCAAG GATCAAGCCA ATGA
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| Protein sequence | MSAEAPLLEV TDLQTTFDIT KKLSIRAVDG VSFSVNAGET LAIVGESGSG KSVTSLSIMG
LLPKDVGRVS GGSIKLHGRD ITNLSEPEMR EIRGKEIGMI FQEPMTSLNP VHTVGQQIAE
MAIRHEGLSP SKARTRAIEM LDLVGIPEPA TRVDNYPHQM SGGMRQRAMI AMALACEPRI
LIADEPTTAL DVTIQAQMLE LMQDLQDKLG MAIIFITHDL GVVAEVADRV VVMYAAQVVE
TAGVEDIFET PRMPYTAGLM NSIPRLGSSV NKVRLEAIPG SVPALTNLPD GCRFNPRCAF
ATDECRATEP TLDAASAGHM IRCARWQELS LAQGSSQ
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