| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4101 |
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| Symbol | |
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| ID | 3936590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4209245 |
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| End bp | 4210069 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906487 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_512043 |
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| Protein GI | 89056592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.612527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.65761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGT CCTCCTCCCG TCGCAGGATC AATTCCAAAC CCATCGTCAT GGGGCTCTAC
CTGCTGTTTT TGATGCTGCC GATCTACTGG CTTTTGATCA TGAGCCTGAA GACCAATGCC
GAGATTCTGG GCGGCATCAC GCTCTGGCCC GAGAATATGA CGTTCGACAA TTATCGCACG
ATCCTGACGG ACCGCAGTTG GTACATCGGC TACATCAACT CGATCATCTA CGTGACGCTG
AACACGGCCA TCTCCATCGC CGTTGCCTTG CCTGCGGCTT ATGCCTTCAG CCGCTACCAC
TTCATGGGCG ACAAGCACCT GTTCTTCTGG CTGCTCACCA ACCGCATGGC CCCACCCGCC
GTTTTTGCGC TGCCGTTCTT CCAGCTATAT TCCTCGGTCG GGCTGTTTGA CACACACATC
GCCGTGGCAC TGGCCCATTG TCTGTTTAAC GTGCCGCTCG CCGTCTGGAT CCTGGAAGGC
TTCATGCGCG GCGTGCCGAA GGAAATCGAC GAAACTGCCT ATATCGACGG CTACAGCTTC
GGCCGCTTCT TCACCCGCAT CTTCATGCCG CTGATCGCCT CCGGCATCGG CGTGACGGCG
TTCTTCTGCT TCATGTTCTC CTGGGTAGAA CTGTTGCTGT CGCGAACGCT CACGGCAACC
GAAGCGAAAC CGATTGCCGC CATCATGACC CGCACCGTGG GCGCGGCAGG TGTCGACTGG
GGCGTTCTGG CGGCGGCGGG TATCCTGACG ATCATCCCCG GCGCGCTCGT GATCTATTTT
GTCCGCAACT ACATCGCCAA GGGCTTCGCC CTGGGGAGGG TGTGA
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| Protein sequence | MSASSSRRRI NSKPIVMGLY LLFLMLPIYW LLIMSLKTNA EILGGITLWP ENMTFDNYRT
ILTDRSWYIG YINSIIYVTL NTAISIAVAL PAAYAFSRYH FMGDKHLFFW LLTNRMAPPA
VFALPFFQLY SSVGLFDTHI AVALAHCLFN VPLAVWILEG FMRGVPKEID ETAYIDGYSF
GRFFTRIFMP LIASGIGVTA FFCFMFSWVE LLLSRTLTAT EAKPIAAIMT RTVGAAGVDW
GVLAAAGILT IIPGALVIYF VRNYIAKGFA LGRV
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