Gene Jann_4068 details

Gene Information

• Locus tag: Jann_4068
• ID: 3936556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 4176586
• End bp: 4177146
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637906453
• Product: response regulator receiver domain-containing protein
• Protein accession: YP_512010
• Protein GI: 89056559
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.158114
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACGC CAGACCGCAG CCTGAGAGAC ATCGGACCCG ATAAGTCTCT GCTGCTGATC 
GACGATGACG AGCCGTTTCT GCGCAGGCTG GAACGGGCGA TGGAAAAGCG CGGCTTTGAT 
GTGGAGGCGG CGGGATCTGT AGCCGCCGGC ACCGCCATCG CCACCGCGCG TCCGCCCGCC 
TATGCGGTCA TTGATTTGCG GCTGGAGGAC GGCAACGGCC TCGACGTGGT GGAGACGCTG 
CGCGAAAAGC GCCCCGATGC GCGGATCGTT GTGCTGACAG GCTACGGCGC GATTGCGACG 
GCTGTCGCTG CGGTGAAGAT GGGGGCGACG GATTACCTGT CCAAGCCCGC CGACGCCAAC 
GACATCACCT CCGCGCTATT GGCCGAAGAG GAAGAGATGC CGCCCCCGCC GGAAAACCCG 
ATGTCCGCAG ACCGTGTGCG GTGGGAGCAT ATTCAGCGGG TCTATGAGCT GTGCGACCGC 
AACGTCTCCG AGACGGCGCG GCGGCTGAAC ATGCACCGGC GGACGTTGCA ACGTATCCTC 
GCCAAGCGCT CACCACGGTG A 

 

Protein sequence

MATPDRSLRD IGPDKSLLLI DDDEPFLRRL ERAMEKRGFD VEAAGSVAAG TAIATARPPA 
YAVIDLRLED GNGLDVVETL REKRPDARIV VLTGYGAIAT AVAAVKMGAT DYLSKPADAN 
DITSALLAEE EEMPPPPENP MSADRVRWEH IQRVYELCDR NVSETARRLN MHRRTLQRIL 
AKRSPR