| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4034 |
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| Symbol | truB |
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| ID | 3936522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4138214 |
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| End bp | 4139119 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906419 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_511976 |
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| Protein GI | 89056525 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCA GGAACAAGGG CCGCGATATC TCGGGCTGGG TGCTGGTGGA CAAGCCTGCC
GGGCTGACGT CGACGGCGGT GGTCAACAAG GTGCGCTGGT GTTTTGATGC CAAGAAGGCG
GGCCATGCGG GCACGTTGGA CCCCGACGCG ACGGGCATGT TGCCGGTGGC ATTGGGCGAG
GCCACGAAGA CGATTGCCTA TATGAGTGAC GACTTGAAGG CCTACACGTT CCGCGTGCGG
CTGGGGGTGT CCACCAAAAC CGATGACGCG GAGGGGGAGG TTCTGGAGAC CTCGGATACC
CGCCCCACCG ACACGGAGAT CGAGGCCGCG TTGCCCGCCT TCGTCGGTGA TATCCAGCAG
GTGCCGCCGC AGTTTTCTGC CGTGAAGGTG GATGGGGAAC GCGCCTATGA CATTGCACGC
GGCGGCGGCG AGATGGAGCT GGCCGCGCGG GATTTGTACG TGGAGAGCCT GTCGGTGATC
GGGCGCCCCG ATGCGGACCA TGTGGATCTG GAATTCGTCT GCGGCTCGGG CGGCTACGTC
CGCTCCATCG CGCGGGATCT GGGGCAGGTG CTGGGGTGTT TCGGCCATGT GCTGTGGCTG
CGCCGAACCT GGGTTGGAGC GTTCGATATC GAGGATGCGG TGGGCCTGGA CCGGGTGGAG
GCGCTGGCGC GGACAGACGC CTTGTACGCA TTGCTGCAAC CTGTTGGTCT GGCGCTGCAT
GCACTGCCGG AATTGCGCGT GACAGATGCC GGCGCGGCCC GGTTGCGCAA TGGCAACCCC
GGCGGTGTGT TGCCGGGAAA TGTGGAATAT GGGGATCTGG CCTGGGCGTC ACTGAACGGC
ACGCCCGTGG CGGTCGGGCG GTATCGCTCC GGCGAGCTGC ACCCGGAGCG GGTATTCAAT
TTGTGA
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| Protein sequence | MARRNKGRDI SGWVLVDKPA GLTSTAVVNK VRWCFDAKKA GHAGTLDPDA TGMLPVALGE
ATKTIAYMSD DLKAYTFRVR LGVSTKTDDA EGEVLETSDT RPTDTEIEAA LPAFVGDIQQ
VPPQFSAVKV DGERAYDIAR GGGEMELAAR DLYVESLSVI GRPDADHVDL EFVCGSGGYV
RSIARDLGQV LGCFGHVLWL RRTWVGAFDI EDAVGLDRVE ALARTDALYA LLQPVGLALH
ALPELRVTDA GAARLRNGNP GGVLPGNVEY GDLAWASLNG TPVAVGRYRS GELHPERVFN
L
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