Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4030 |
Symbol | rpsO |
ID | 3936518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4134541 |
End bp | 4134810 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637906415 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_511972 |
Protein GI | 89056521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.27506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTA CGCCCGAAGA AAAAGCCCGC CTGATGAAGG AATTCGCCAC CAAAGAAGGC GACACCGGCT CCCCTGAAGT TCAGGTTGCG ATCCTCACCA GCCGGATCTC GACCCTGACC GAGCACTTCA AGAGCCACAA GAAAGACAAC CACTCCCGCC GGGGTCTGTT GATGATGGTG GCCCAGCGCC GGAAGCTGCT GGACTACGCC CGCGCCAAGG ATGAGGGCCG GTATCAAGAC CTGATCAAGC GCCTGGGTAT CCGCCGCTAA
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Protein sequence | MSITPEEKAR LMKEFATKEG DTGSPEVQVA ILTSRISTLT EHFKSHKKDN HSRRGLLMMV AQRRKLLDYA RAKDEGRYQD LIKRLGIRR
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