| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4017 |
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| Symbol | |
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| ID | 3936505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4120509 |
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| End bp | 4121246 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906402 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511959 |
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| Protein GI | 89056508 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.980517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGATT GGACGGGAAA GCGGTATTGG CTGATCGGAG CGTCAGACGG TCTTGGGCGT
GAATTGGCTG GCCTGATGAG CCGATCCGGC ATCGAAGTGG TGCTGTCCGC GCGATCTGAG
GACAAGCTGA ACGCGGTGGC CGAAGACTTG CCCGGTGCGG CGACGGTCGT GACCGTAGAC
GTCTCGGACC GCGCGTCGGT GGAGGCGGCG GCGGAGGCCG TGGGCGAGGT TGACGGCGTC
GTGTTCCTGG CCGGGCTGGG GACGCTGATC AAGGCCACGG AGTGGGACGC CGACAAGGTC
GAGCAATTGT TCGATGTCAA CCTGATCGGG GCCGCGCGGG TCATCGGCCA GGTCATTGGC
CCCATGGTGG AACGCAATTC CGGGCACATC ATGCTGATCG GATCGCTCTC GGCCTATCGC
GGCCTGCCCG GCGCCATCGG GTATTCGGCC TCCAAGGCGG GGCTGATGTC GCTGGCGGAA
TCCATGCACG GGGACCTGAA AGACACCAAC GTGCTCGTGC AGCTGGCCAA CCCCGGCTAT
ATCGAGACCC AGATGCAGGA CAACAACCCG CATCCCAAGC CGTTCATGAT GACGCCCGAG
GTCGCCGCGC GCGAGGTGTT CGAGCAGATG AACACCGATA CGTTCCACAA GGCGTTCCCG
ATTGGCTTCA GCCTGCTGTT CCGCCTGTCG CGGTTCCTGC CGACGTCGGT CTATGAATGG
ATCTTCTTCC GCCGCTGA
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| Protein sequence | MRDWTGKRYW LIGASDGLGR ELAGLMSRSG IEVVLSARSE DKLNAVAEDL PGAATVVTVD
VSDRASVEAA AEAVGEVDGV VFLAGLGTLI KATEWDADKV EQLFDVNLIG AARVIGQVIG
PMVERNSGHI MLIGSLSAYR GLPGAIGYSA SKAGLMSLAE SMHGDLKDTN VLVQLANPGY
IETQMQDNNP HPKPFMMTPE VAAREVFEQM NTDTFHKAFP IGFSLLFRLS RFLPTSVYEW
IFFRR
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