Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4005 |
Symbol | |
ID | 3936493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4109020 |
End bp | 4110174 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637906390 |
Product | inner-membrane translocator |
Protein accession | YP_511947 |
Protein GI | 89056496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCCACG ACACCCACCC ACCCGCAGAC CTTCTGGACG GCGTGCGATT TAACGAAGGG GAGCGTCTGA TGTTCTACCG TGAAGCGGGC GATTACAAAA CGTCCTATGC CGCCGACAAC CAAACCTTCC CGATCCTGTT TGATCGGTAT CGGTACTACT TTGTCCTGAT CGTGGGCGCG TTGATCATTC CGTTCGTGCT GAATGATTAC TGGGCGAACT CGATTCTGAT CCCGTTCCTG ATCTATGCGA TTGCGGCTAT CGGGCTGAAC ATTCTGACGG GCTATTGCGG GCAGGTCAGC CTTGGCACGG GCGGGTTCAT GGCCGTTGGG GCCTATACGT CCTACAAGCT GATGACGGCG TTTCCGGGCC TCGACATGAT CTCGGTCACG CTTCTATCGG GTGTGATGAC GGCGATGGTC GGTGTGGCGT TTGGCCTGCC GAGCCTGAGG ATCAAGGGGT TTTATCTGGC CGTAGCCACG CTGGCGGCGC AGTTCTTCCT GGTGTGGCTC TTCAACAAGG TGCCGTGGTT CTACAATTAC TCCGCCTCGG GCCAGATCTC CGCGCCGGAG CGGGATTTCT TCTACTTCAC GGGCATTCCC GTCACCGGCC CCAATGCAGA GGCCTGGGCG AAATATCTGT TCTGTTTCCT GTTCGTCTTC GTGCTGGCCT GGGTCGCGCG GAACCTGACG CGGGGCAGCG TGGGGCGGCA GTGGATGGCG ATCCGCGATA TGGACATCGC CGCAGAAATC ATTGGGGTGA ATCCGTTGAA GGCGAAGCTG ACGGCCTTTG CGGTCAGCAG CTTCTACGTT GGTATCGCGG GGGCGCTTTT GTTCACCGTG TATCTGGGCG CGGTGGAAGT GGGCGAGGTC TACGGCATCA CCAAGAGCTT TCTGGTGCTG TTCATGATCA TCATCGGCGG GTTGGGCAGT ATCTTCGGCA GCTTTGCGGG CGCGGCGTTC ATGGTGATCT TGCCGGTCGT TTTGCGCAAC TTCCTGACCG GCACGATGAA TTGGGACAGC GCGCTTGCCA CCCACTTCGA GTTCGTCATC GTGGGGGCGT TGATCATGTT CTTCCTGATC GTGGAACCGC ACGGGTTGGC ACGCCTTTGG GCGCTGGTGA AAGAGAAATT GAGATTGTGG CCGTTTCCGC ATTAG
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Protein sequence | MAHDTHPPAD LLDGVRFNEG ERLMFYREAG DYKTSYAADN QTFPILFDRY RYYFVLIVGA LIIPFVLNDY WANSILIPFL IYAIAAIGLN ILTGYCGQVS LGTGGFMAVG AYTSYKLMTA FPGLDMISVT LLSGVMTAMV GVAFGLPSLR IKGFYLAVAT LAAQFFLVWL FNKVPWFYNY SASGQISAPE RDFFYFTGIP VTGPNAEAWA KYLFCFLFVF VLAWVARNLT RGSVGRQWMA IRDMDIAAEI IGVNPLKAKL TAFAVSSFYV GIAGALLFTV YLGAVEVGEV YGITKSFLVL FMIIIGGLGS IFGSFAGAAF MVILPVVLRN FLTGTMNWDS ALATHFEFVI VGALIMFFLI VEPHGLARLW ALVKEKLRLW PFPH
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